Co-expression analysis

Gene ID Os12g0455000
Gene name
Homology with ArabidopsisSimilar to At4g09450: myb family transcription factor (HF=1e+0)
Module size 6 genes
NF 0.67
%ile 90.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5676.30.85Os12g0455000AK111239.1-Conserved hypothetical protein1e+0At4g09450myb family transcription factorO.I.H.G.S.X.
0.8094.60.85Os10g0334500NM_195796.1-Conserved hypothetical protein2e-2At1g07700thioredoxin family proteinO.I.H.G.S.X.
0.7391.10.90Os07g01749009635.m00735-Plant lipid transfer protein/Par allergen familyprotein5e+0At5g26890unknown proteinO.I.H.G.S.X.
0.6787.20.89Os01g0127000AK105526.1-Multicopper oxidase, type 1 domain containingprotein4e+0At5g02270ATNAP9O.I.H.G.S.X.
0.5573.70.87Os06g0169900CB096301-Hypothetical protein5e-1At5g1432030S ribosomal protein S13, chloroplast (CS13)O.I.H.G.S.X.
0.5068.00.89Os02g0791400AK062787.1-Cytochrome oxidase c, subunit VIb family protein6e+0At2g47910CRR6 (chlororespiratory reduction 6)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
37.299.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
24.899.5GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.198.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.198.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0531GO:0006869The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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