Co-expression analysis

Gene ID Os12g0448400
Gene name
Homology with ArabidopsisSimilar to At1g17300: unknown protein (HF=4e+0)
Module size 11 genes
NF 0.53
%ile 70.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7289.80.82Os12g0448400AK062371.1-Conserved hypothetical protein4e+0At1g17300unknown proteinO.I.H.G.S.X.
0.7088.40.88Os08g04916009636.m03866--1e+0At4g13800permease-relatedO.I.H.G.S.X.
0.6079.70.84Os07g0226200AK108016.1-Conserved hypothetical protein5e+0At5g17170ENH1 (enhancer of sos3-1)O.I.H.G.S.X.
0.6079.70.87Os03g0575500AK062576.1-Conserved hypothetical protein2e+0At3g50250unknown proteinO.I.H.G.S.X.
0.5068.00.86Os01g0362400AK062630.1-Hypothetical protein5e+0At4g20006unknown proteinO.I.H.G.S.X.
0.5068.00.87Os05g0439200AK069208.1-Hypothetical protein6e+0At1g50350-O.I.H.G.S.X.
0.4863.70.84Os08g0301600AK072190.1-Conserved hypothetical protein2e+0At3g59620-O.I.H.G.S.X.
0.4458.10.89Os03g0857100AK105192.1-Hypothetical protein6e-2At5g60460sec61beta family proteinO.I.H.G.S.X.
0.3644.00.85Os07g0255300CF325926-Conserved hypothetical protein3e+0At5g60460sec61beta family proteinO.I.H.G.S.X.
0.3338.80.88Os03g0722200AK068522.1-Hypothetical protein2e-2At1g62240unknown proteinO.I.H.G.S.X.
0.2931.10.89Os06g0197200AK059180.1-20 kDa chaperonin, chloroplast precursor (ProteinCpn21) (Chloroplast protein Cpn10) (Chloroplastchaperonin 10) (Ch-CPN10) (Chaperonin 20)2e-2At4g26730methyltransferaseO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
47.799.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
26.499.5GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.798.9GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.498.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.298.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.298.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.798.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.598.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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