Co-expression analysis

Gene ID Os12g0293100
Gene name
Homology with ArabidopsisSimilar to At4g22640: - (HF=2e+0)
Module size 8 genes
NF 0.56
%ile 75.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6181.20.97Os12g0293100AF288216.1-Telomerase reverse transcriptase2e+0At4g22640-O.I.H.G.S.X.
0.6483.40.97Os03g0308500CB639253-DEAD/DEAH box helicase, N-terminal domaincontaining protein5e-7At2g47330DEAD/DEAH box helicase, putativeO.I.H.G.S.X.
0.6483.40.97Os10g0561200AK066634.1-Conserved hypothetical protein4e+0At4g39260GR-RBP8O.I.H.G.S.X.
0.5573.70.97Os05g0387900AK062285.1-Conserved hypothetical protein7e-3At2g41760unknown proteinO.I.H.G.S.X.
0.5269.60.97Os03g0748800BX927843-DEIH-box RNA/DNA helicase5e-11At5g04895ATP binding / ATP-dependent helicase/ double-stranded RNA binding / helicase/ nucleic acid bindingO.I.H.G.S.X.
0.5269.60.97Os01g0647800CA760302-Conserved hypothetical protein3e-1At3g61950basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.4458.10.97Os10g0104700AK072615.1-Octicosapeptide/Phox/Bem1p domain containingprotein3e-2At2g46640unknown proteinO.I.H.G.S.X.
0.4355.40.97Os05g0317300AK064846.1-FAR1 domain containing protein4e-1At5g25750unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.598.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.698.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.098.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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