CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os12g0266500

Gene name
Homology with Arabidopsis Similar to At3g14670: unknown protein (HF=4e-2)

Module size 13 genes

NF 0.61

%ile 83.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.77 93.1 0.98 Os12g0266500 9640.m01621 - - 4e-2 At3g14670 unknown protein O.I. H.G. S.X.
0.71 89.6 0.99 Os02g0563700 9630.m03385 - - 3e+0 At2g26120 glycine-rich protein O.I. H.G. S.X.
0.69 87.9 0.99 Os06g0180600 9634.m00760 - - 2e+0 At1g65770 F-box family protein O.I. H.G. S.X.
0.69 87.9 0.99 Os01g0116550 NM_184094.1 - - 4e+0 At2g01505 CLE16 (CLAVATA3/ESR-RELATED 16) O.I. H.G. S.X.
0.64 83.4 0.99 Os01g0659500 NM_192460.1 - - 4e+0 At5g50370 adenylate kinase, putative O.I. H.G. S.X.
0.61 81.2 0.99 Os08g0206500 9636.m01016 - Transcription factor CBF/NF-Y/archaeal histonedomain containing protein 5e-2 At1g54830 NF-YC3 (NUCLEAR FACTOR Y, SUBUNIT C3) O.I. H.G. S.X.
0.58 77.0 0.99 Os06g0665601 9634.m04419 - - 7e+0 At2g01890 PAP8 (PURPLE ACID PHOSPHATASE 8) O.I. H.G. S.X.
0.56 76.3 0.99 Os01g0626601 9629.m04206 - - 8e-2 At3g44140 unknown protein O.I. H.G. S.X.
0.55 73.7 0.99 Os11g0172900 9639.m00656 - - 1e-1 At4g21230 protein kinase family protein O.I. H.G. S.X.
0.55 73.7 0.99 Os03g0354700 9631.m02326 - - 6e+0 At3g60966 protein binding / zinc ion binding O.I. H.G. S.X.
0.49 64.4 0.99 Os08g0213280 9636.m01074 - - 3e+0 At1g62060 unknown protein O.I. H.G. S.X.
0.46 60.9 0.99 Os06g0173700 9634.m00702 - - 3e+0 At5g51520 invertase/pectin methylesterase inhibitor family protein O.I. H.G. S.X.
0.43 55.4 0.99 Os01g0340000 9629.m02291 - - 4e-2 At2g17705 unknown protein O.I. H.G. S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.3 99.7 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
25.1 99.5 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
13.4 98.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.9 98.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.1 98.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.0 98.3 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.2 98.2 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.0 98.2 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.8 98.1 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.7 98.1 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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