Co-expression analysis

Gene ID Os12g0258700
Gene name
Homology with ArabidopsisSimilar to At5g05390: LAC12 (laccase 12) (HF=1e-3)
Module size 11 genes
NF 0.69
%ile 92.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5676.30.76Os12g0258700BI813311-Multicopper oxidase, type 1 domain containingprotein1e-3At5g05390LAC12 (laccase 12)O.I.H.G.S.X.
0.8496.00.83Os10g0527400D10861.1-Glutathione S-transferase TSI-1 (EC 2.5.1.18)(Glutathione S- transferase 1)5e-1At2g29450ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5)O.I.H.G.S.X.
0.7893.40.77Os04g0339400AK103553.1-Aldo/keto reductase family protein1e-5At1g60690aldo/keto reductase family proteinO.I.H.G.S.X.
0.7591.90.79Os03g0283200AF237487.2-IN2-1 protein2e+0At5g02780In2-1 protein, putativeO.I.H.G.S.X.
0.7289.80.80Os01g0638000AK103824.1-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein1e-2At1g22380AtUGT85A3 (UDP-glucosyl transferase 85A3)O.I.H.G.S.X.
0.6787.20.79Os02g0755900AK104985.1-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein8e-1At1g22340AtUGT85A7 (UDP-glucosyl transferase 85A7)O.I.H.G.S.X.
0.6483.40.79Os01g0934800Z34270.1-Alpha/beta hydrolase fold domain containingprotein1e-1At2g23580MES4 (METHYL ESTERASE 4)O.I.H.G.S.X.
0.6483.40.80Os01g0627600AK101667.1-Cytochrome P450 monooxygenase CYP72A5 (Fragment)1e-2At3g14630CYP72A9O.I.H.G.S.X.
0.6079.70.75Os10g0528300AF309378.1-Tau class GST protein 42e-4At3g43800ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27)O.I.H.G.S.X.
0.6079.70.76Os10g0530900AF309376.1-Glutathione S-transferase GST 30 (EC 2.5.1.18)2e+0At1g18680HNH endonuclease domain-containing proteinO.I.H.G.S.X.
0.5877.00.76Os08g0156100AK063249.1-Conserved hypothetical protein1e+0At3g23170unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.998.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.098.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.998.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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