Co-expression analysis

Gene ID Os12g0238100
Gene name
Homology with ArabidopsisSimilar to At5g12370: SEC10 (EXOCYST COMPLEX COMPONENT SEC10) (HF=6e-40)
Module size 6 genes
NF 0.59
%ile 79.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.80.97Os12g0238100AK064983.1-Exocyst complex component Sec10 family protein6e-40At5g12370SEC10 (EXOCYST COMPLEX COMPONENT SEC10)O.I.H.G.S.X.
0.8094.60.96Os06g06695009634.m04454-Hypothetical protein3e-17At5g51430EYE (EMBRYO YELLOW)O.I.H.G.S.X.
0.4458.10.97Os10g0512700AK067223.1-SH3 domain-containing protein 33e-9At4g34660SH3 domain-containing protein 2 (SH3P2)O.I.H.G.S.X.
0.4458.10.97Os02g0208900AK070031.1-ZIGA2 protein (Fragment)6e-3At4g32630ARF GTPase activator/ zinc ion bindingO.I.H.G.S.X.
0.4051.10.97Os03g0113800AK065925.1-ARM repeat fold domain containing protein6e-11At5g41950bindingO.I.H.G.S.X.
0.2931.10.97Os01g0653800AK111531.1-WD40-like domain containing protein1e-32At5g24710-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
26.799.6GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.398.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.697.9GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1431GO:0043087Any process that modulates the rate of GTP hydrolysis by a GTPase.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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