Co-expression analysis

Gene ID Os12g0209100
Gene name
Homology with ArabidopsisSimilar to At4g02090: unknown protein (HF=4e-1)
Module size 6 genes
NF 0.40
%ile 48.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5068.00.95Os12g02091009640.m01005-Conserved hypothetical protein4e-1At4g02090unknown proteinO.I.H.G.S.X.
0.5573.70.96Os02g0602500AK064340.1-Isy1-like splicing family protein5e-8At3g18790-O.I.H.G.S.X.
0.4762.30.96Os02g04959009630.m02799-Conserved hypothetical protein1e+0At3g01990ACR6O.I.H.G.S.X.
0.3644.00.96Os09g0364900AK120754.1-SNF1-related kinase complex anchoring protein SIP14e-1At5g19800hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3338.80.96Os08g0567200AK061692.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein3e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.
0.2625.60.96Os01g0727400AK065692.1-Conserved hypothetical protein6e-16At1g72420-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.199.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.799.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.998.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM409428Nipponbare_young panicle 2cm, biological rep4GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChipLink to GEO
9.998.0GSM409421Nipponbare_young panicle 2cm, biological rep1GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChipLink to GEO
9.197.9GSM409429Nipponbare_young panicle 2cm, biological rep5GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChipLink to GEO
8.897.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM409422Nipponbare_young panicle 2cm, biological rep2GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChipLink to GEO
8.697.8GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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