Co-expression analysis

Gene ID Os12g0182500
Gene name
Homology with ArabidopsisSimilar to At4g13160: unknown protein (HF=5e-1)
Module size 6 genes
NF 0.42
%ile 52.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4051.10.90Os12g0182500AK064710.1-Hypothetical protein5e-1At4g13160unknown proteinO.I.H.G.S.X.
0.4660.90.90Os01g0719600AK070988.1-Heavy metal transport/detoxification proteindomain containing protein2e-6At3g24450copper-binding family proteinO.I.H.G.S.X.
0.4458.10.92Os01g0666700AU184785-Cytochrome b561 / ferric reductase transmembranedomain containing protein2e+0At4g29030glycine-rich proteinO.I.H.G.S.X.
0.4051.10.89Os10g0377300AY346329.1-Homeobox domain containing protein4e-5At2g18550HB-2 (HOMEOBOX-2)O.I.H.G.S.X.
0.3846.90.90Os03g0127700AK101081.1-Protein kinase domain containing protein2e-9At1g62950leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.2727.50.90Os02g07534009630.m05087-Conserved hypothetical protein5e-1At4g11300unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
41.599.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.198.2GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.697.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.897.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.297.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0281GO:0030001The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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