Co-expression analysis

Gene ID Os12g0149000
Gene name
Homology with ArabidopsisSimilar to At4g01895: systemic acquired resistance (SAR) regulator protein NIMIN-1-related (HF=4e-2)
Module size 6 genes
NF 0.41
%ile 51.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.89Os12g0149000AK108734.1-Hypothetical protein4e-2At4g01895systemic acquired resistance (SAR) regulator protein NIMIN-1-relatedO.I.H.G.S.X.
0.5371.30.88Os01g09177009629.m06846-PAK-box/P21-Rho-binding domain containing protein7e-2At1g70190ribosomal protein L12 family proteinO.I.H.G.S.X.
0.4660.90.87Os07g0634900C99577-Myb, DNA-binding domain containing protein4e-5At3g12720ATMYB67 (MYB DOMAIN PROTEIN 67)O.I.H.G.S.X.
0.3134.50.89Os03g01943009631.m00886-Protein of unknown function DUF568 domaincontaining protein4e-5At2g04850auxin-responsive protein-relatedO.I.H.G.S.X.
0.3134.50.89Os06g0247900AK065325.1-Endo-beta-1,4-glucanase precursor (EC 3.2.1.4)1e-5At1g64390AtGH9C2 (Arabidopsis thaliana glycosyl hydrolase 9C2)O.I.H.G.S.X.
0.2219.40.90Os09g05553009637.m03266-Cyclin-like F-box domain containing protein1e-3At3g42310unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.598.1GSM302915emb6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
9.497.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.197.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM302914emb6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
6.897.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.297.1GSM4094339311_young panicle 2cm, biological rep4GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChipLink to GEO
6.097.0GSM4094329311_young panicle 2cm, biological rep3GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChipLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1251GO:0006584The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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