Co-expression analysis

Gene ID Os11g0702000
Gene name
Homology with ArabidopsisSimilar to At5g52990: vesicle-associated membrane protein-related (HF=7e+0)
Module size 6 genes
NF 0.61
%ile 82.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.99Os11g0702000AK106678.1-Conserved hypothetical protein7e+0At5g52990vesicle-associated membrane protein-relatedO.I.H.G.S.X.
0.7189.60.99Os12g02734339640.m01713--3e+0At3g01329-O.I.H.G.S.X.
0.6787.20.99Os06g01457009634.m00456--1e-2At1g16060ovule development protein, putativeO.I.H.G.S.X.
0.5573.70.99Os06g04975009634.m02904--3e+0At3g21890zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.4863.70.99Os07g02430009635.m01377-Conserved hypothetical protein2e+0At4g34131UGT73B3 (UDP-glucosyl transferase 73B3)O.I.H.G.S.X.
0.4051.10.99Os05g05285009633.m04232--2e-2At2g46130WRKY43O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.399.7GSM159271Rice coleoptiles, 4 days old, anoxic, REPLICATE 1 (Sample #11)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice ColeoptileLink to GEO
19.699.1GSM159272Rice coleoptiles, 4 days old, anoxic, REPLICATE 2 (Sample #12)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice ColeoptileLink to GEO
17.498.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.698.8GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.598.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.098.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.998.5GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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