Co-expression analysis

Gene ID Os11g0687700
Gene name
Homology with ArabidopsisSimilar to At4g14540: NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3) (HF=3e+0)
Module size 6 genes
NF 0.76
%ile 96.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.60.98Os11g06877009639.m04295--3e+0At4g14540NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3)O.I.H.G.S.X.
0.8395.80.98Os07g01399009635.m00404--3e-1At2g36010E2F3 (E2F TRANSCRIPTION FACTOR 3)O.I.H.G.S.X.
0.7793.10.98Os11g06315009639.m03799--6e-1At1g21940unknown proteinO.I.H.G.S.X.
0.6787.20.98Os04g04389009632.m03451--3e-1At5g51812unknown proteinO.I.H.G.S.X.
0.6787.20.99Os04g02749009632.m01890--8e-1At1g15900unknown proteinO.I.H.G.S.X.
0.5777.00.99Os03g0775900NM_184907.1--3e+0At4g24026unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
32.999.8GSM255763antiOsLIC collar chipGSE12097antiOsLIC collar chipLink to GEO
24.699.4GSM255762wt collar chipGSE12097antiOsLIC collar chipLink to GEO
15.098.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.798.6GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.098.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.398.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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