Co-expression analysis

Gene ID Os11g0644500
Gene name
Homology with ArabidopsisSimilar to At1g28450: AGL58 (AGAMOUS-LIKE 58) (HF=3e+0)
Module size 6 genes
NF 0.05
%ile 3.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.80.97Os11g06445009639.m03915-Transferase family protein3e+0At1g28450AGL58 (AGAMOUS-LIKE 58)O.I.H.G.S.X.
0.094.90.97Os08g03051509636.m02087--5e+0At5g61660glycine-rich proteinO.I.H.G.S.X.
0.063.00.97Os02g0738300AK108113.1-Conserved hypothetical protein1e-1At4g14695unknown proteinO.I.H.G.S.X.
0.042.00.98Os11g02218009639.m01091--9e-1At2g39020GCN5-related N-acetyltransferase (GNAT) family proteinO.I.H.G.S.X.
0.031.40.97Os05g04738009633.m03691--2e+0At2g27530PGY1 (PIGGYBACK1)O.I.H.G.S.X.
0.031.40.97Os07g0185100AK119508.1-Conserved hypothetical protein7e-1At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.498.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.798.4GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.398.3GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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