Co-expression analysis

Gene ID Os11g0637700
Gene name
Homology with ArabidopsisSimilar to At5g47620: heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative (HF=8e-11)
Module size 22 genes
NF 0.25
%ile 24.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8496.00.94Os11g0637700AK071789.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein8e-11At5g47620heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putativeO.I.H.G.S.X.
0.4558.80.98Os03g0581800AK121839.1-Hypothetical protein2e-2At2g20820unknown proteinO.I.H.G.S.X.
0.4051.10.95Os04g0658000AK068928.1-Possible apospory-associated like protein5e-4At3g61610aldose 1-epimerase family proteinO.I.H.G.S.X.
0.3644.00.97Os03g0744800AK072451.1-contains InterPro domain(s): IPR000348, IPR0090382e-2At3g22845emp24/gp25L/p24 protein-relatedO.I.H.G.S.X.
0.3541.70.97Os02g0175800AK058292.1-Conserved hypothetical protein2e+0At5g28610-O.I.H.G.S.X.
0.3440.00.97Os03g0129900AK059624.1-NADH-ubiquinone oxidoreductase B18 subunit familyprotein1e+0At4g26820-O.I.H.G.S.X.
0.2931.10.96Os06g0653900BI797949-SEC61 complex gamma subunit family protein4e-1At5g07440GDH2 (GLUTAMATE DEHYDROGENASE 2)O.I.H.G.S.X.
0.2727.50.98Os05g0122900AB072977.1--8e-5At1g76200unknown proteinO.I.H.G.S.X.
0.2625.60.97Os07g0645400AK065185.1-NADH dehydrogenase (EC 1.6.99.3)0At5g08530CI51 (51 kDa subunit of complex I)O.I.H.G.S.X.
0.2524.10.95Os03g0712700AK121196.1-Phosphoglucomutase, cytoplasmic 2 (EC 5.4.2.2)(Glucose phosphomutase 2) (PGM 2)4e-1At2g30560glycine-rich proteinO.I.H.G.S.X.
0.2422.40.96Os12g0123900AK061862.1-Hypothetical protein3e+0At5g27690heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.2321.20.99Os02g0284600AK121593.1-60S ribosomal protein L273e-11At4g1500060S ribosomal protein L27 (RPL27C)O.I.H.G.S.X.
0.2321.20.96Os05g0155500AK100133.1-Importin alpha 2 subunit (NLS receptor)2e-22At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)O.I.H.G.S.X.
0.2321.20.95Os04g0394200AK068154.1-Rattus norvegicus DLST dihydrolipoamidesuccinyltransferase, exon 15 and complete cds1e-39At5g550702-oxoacid dehydrogenase family proteinO.I.H.G.S.X.
0.2117.90.99Os05g0160200L31941.1-The start codon is not identified.6e-74At2g47110UBQ6O.I.H.G.S.X.
0.2016.50.96Os05g0159100AK103137.1-Eukaryotic protein of unknown function DUF846family protein3e-18At1g09330unknown proteinO.I.H.G.S.X.
0.2016.50.96Os02g0104800AK070860.1-Conserved hypothetical protein1e-1At3g04630WDL1O.I.H.G.S.X.
0.1915.10.99Os02g0797200AK120800.1-60S ribosomal protein L396e-11At3g0219060S ribosomal protein L39 (RPL39B)O.I.H.G.S.X.
0.1813.70.98Os02g0717800AK105284.1-Ribosomal protein L31e domain containing protein3e-10At5g5671060S ribosomal protein L31 (RPL31C)O.I.H.G.S.X.
0.1611.30.96Os05g0208000AK063666.1-2-oxoglutarate/malate translocator9e-16At5g19760dicarboxylate/tricarboxylate carrier (DTC)O.I.H.G.S.X.
0.149.30.96Os07g0246300AK111786.1-Sec13p3e+0At4g18930cyclic phosphodiesteraseO.I.H.G.S.X.
0.094.90.96Os10g0400800CB625883-Phenylalanyl-tRNA synthetase alpha chain (EC6.1.1.20) (Phenylalanine--tRNA ligase alpha chain)(PheRS) (CML33)4e-1At4g39280phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.098.8GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
16.598.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.298.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.897.8GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0771GO:0006120The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I.Link to AmiGO
0.0771GO:0009741A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brassinosteroid stimulus.Link to AmiGO
0.0671GO:0006606The directed movement of a protein from the cytoplasm to the nucleus.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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