Co-expression analysis

Gene ID Os11g0557700
Gene name
Homology with ArabidopsisSimilar to At4g34360: protease-related (HF=9e-7)
Module size 6 genes
NF 0.31
%ile 32.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.98Os11g0557700AK107593.1-SAM (and some other nucleotide) binding motifdomain containing protein9e-7At4g34360protease-relatedO.I.H.G.S.X.
0.4051.10.98Os02g0536400AK120158.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein2e+0At3g47295unknown proteinO.I.H.G.S.X.
0.3644.00.98Os09g05362009637.m03080-ARM repeat fold domain containing protein7e-5At5g66200ARO2 (ARMADILLO REPEAT ONLY 2)O.I.H.G.S.X.
0.3644.00.98Os09g0546400AK072378.1--1e+0At2g41225unknown proteinO.I.H.G.S.X.
0.1712.60.98Os11g01068009639.m00055-Hypothetical protein3e-1At3g06780glycine-rich proteinO.I.H.G.S.X.
0.127.20.98Os10g0484400AK107124.1-Ribosomal protein L18P/L5E family protein3e-1At3g22450structural constituent of ribosomeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
35.899.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
28.099.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
22.099.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
18.899.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
18.098.9GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.598.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.398.8GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.598.7GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.398.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.598.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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