Co-expression analysis

Gene ID Os11g0447300
Gene name
Homology with ArabidopsisSimilar to At2g41670: GTP-binding family protein (HF=8e-4)
Module size 6 genes
NF 0.42
%ile 53.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.94Os11g0447300AK108044.1-GTP-binding protein, HSR1-related domaincontaining protein8e-4At2g41670GTP-binding family proteinO.I.H.G.S.X.
0.6787.20.95Os08g0156900AK073344.1-DNA topoisomerase, type II family protein4e-9At1g63990SPO11-2 (SPORULATION 11-2)O.I.H.G.S.X.
0.4253.90.95Os05g0417100AK073199.1-Peptidase S1C, hrtA/degQ family protein4e-25At5g36950DegP10 (DegP protease 10)O.I.H.G.S.X.
0.4051.10.96Os12g0563400AK067785.1-Protein of unknown function DUF341 family protein2e-8At1g09280-O.I.H.G.S.X.
0.2931.10.95Os04g06763009632.m05660-Dihydroorotate dehydrogenase, mitochondrialprecursor (EC 1.3.3.1) (Dihydroorotate oxidase)(DHOdehase)4e-21At5g23300PYRD (pyrimidine d)O.I.H.G.S.X.
0.2219.40.95Os03g0681900AK062094.1-Zn-finger, CCHC type domain containing protein1e-2At1g60650glycine-rich RNA-binding protein, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
35.899.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.498.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.198.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.598.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2001GO:0007131The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity.Link to AmiGO
0.1051GO:0006265The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number.Link to AmiGO
0.0911GO:0006259The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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