Co-expression analysis

Gene ID Os11g0444500
Gene name
Homology with ArabidopsisSimilar to At5g57450: XRCC3 (HF=1e+1)
Module size 6 genes
NF 0.68
%ile 90.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7793.10.99Os11g04445009639.m02279--1e+1At5g57450XRCC3O.I.H.G.S.X.
0.6787.20.99Os05g05919509633.m04854--8e-1At2g05380GRP3S (GLYCINE-RICH PROTEIN 3 SHORT ISOFORM)O.I.H.G.S.X.
0.6382.70.99Os01g08200009629.m05941-Trans-cinnamate 4-monooxygenase (EC 1.14.13.11)(Cinnamic acid 4- hydroxylase) (CA4H) (C4H) (P450C4H)(Cytochrome P450 73)1e-17At2g30490C4H (CINNAMATE-4-HYDROXYLASE)O.I.H.G.S.X.
0.5573.70.99Os02g02088009630.m01061--3e+1At5g27238-O.I.H.G.S.X.
0.5573.70.99Os02g06525009630.m04197--5e-1At4g09840unknown proteinO.I.H.G.S.X.
0.5573.70.99Os11g02586019639.m01408--2e+0At2g36026-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
30.199.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.698.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.898.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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