CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os11g0438000

Gene name
Homology with Arabidopsis Similar to At5g19090: heavy-metal-associated domain-containing protein (HF=2e+0)

Module size 7 genes

NF 0.20

%ile 18.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.57 77.0 0.97 Os11g0438000 AK073048.1 - Conserved hypothetical protein 2e+0 At5g19090 heavy-metal-associated domain-containing protein O.I. H.G. S.X.
0.44 58.1 0.97 Os06g0483500 AK119390.1 - Hypothetical protein 2e+0 At3g55350 unknown protein O.I. H.G. S.X.
0.33 38.8 0.97 Os05g0451200 AK073037.1 - Hypothetical protein 4e-5 At2g38060 PHT4 O.I. H.G. S.X.
0.29 31.1 0.97 Os01g0254800 AK065568.1 - Hypothetical protein 3e+0 At3g59390 unknown protein O.I. H.G. S.X.
0.23 21.2 0.97 Os04g0419800 AK110859.1 - Conserved hypothetical protein 1e-2 At4g22340 phosphatidate cytidylyltransferase, putative / CDP-diglyceride synthetase, putative O.I. H.G. S.X.
0.17 12.6 0.97 Os01g0552500 AK068070.1 - Conserved hypothetical protein 1e+1 At3g43970 unknown protein O.I. H.G. S.X.
0.07 3.7 0.97 Os10g0540100 AK074016.1 - Protein prenyltransferase domain containingprotein 9e-2 At4g30700 pentatricopeptide (PPR) repeat-containing protein O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.0 98.8 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.5 98.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.3 98.6 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.3 98.6 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.5 98.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.2 98.4 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.6 98.4 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
12.5 98.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.7 98.2 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.0 98.0 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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