Co-expression analysis

Gene ID Os11g0433500
Gene name
Homology with ArabidopsisSimilar to At4g14160: transport protein, putative (HF=1e-9)
Module size 6 genes
NF 0.51
%ile 67.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.97Os11g0433500AK067849.1-Protein transport protein Sec23A (SEC23-relatedprotein A)1e-9At4g14160transport protein, putativeO.I.H.G.S.X.
0.6787.20.98Os05g0461000AB042259.1-Clathrin adaptor complex, small chain familyprotein5e-1At4g08520clathrin adaptor complex small chain family proteinO.I.H.G.S.X.
0.5068.00.98Os07g0496000AK111986.1-Nt-rab6 protein9e-68At2g44610RAB6AO.I.H.G.S.X.
0.4660.90.98Os11g0181100AK100605.1-Nonaspanin (TM9SF) family protein2e-70At1g10950endomembrane protein 70, putativeO.I.H.G.S.X.
0.4458.10.97Os03g0783700AF443602.1-Clathrin assembly small subunit protein AP19(Clathrin assembly protein AP19, small subunit)5e-19At2g17380AP19O.I.H.G.S.X.
0.2625.60.97Os05g0556100AK065908.1-SDL5A1e-43At3g61760ADL1B (ARABIDOPSIS DYNAMIN-LIKE 1B)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
45.099.9GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.398.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.198.2GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0412GO:0006886The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.Link to AmiGO
0.0361GO:0007264Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.Link to AmiGO
0.0291GO:0015031The directed movement of proteins into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage