Co-expression analysis

Gene ID Os11g0242100
Gene name
Homology with ArabidopsisSimilar to At5g49900: catalytic/ glucosylceramidase (HF=8e-12)
Module size 6 genes
NF 0.24
%ile 23.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7793.10.93Os11g0242100AK069387.1-Protein of unknown function DUF608 domaincontaining protein8e-12At5g49900catalytic/ glucosylceramidaseO.I.H.G.S.X.
0.3644.00.96Os12g0600400AK066514.1-Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)(Pyridoxal kinase- like protein SOS4) (Salt overlysensitive 4)4e-21At5g37850SOS4 (SALT OVERLY SENSITIVE 4)O.I.H.G.S.X.
0.1915.10.95Os01g0655800AK067776.1-Acyl-CoA synthetase (EC 6.2.1.3)4e-25At4g11030long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putativeO.I.H.G.S.X.
0.1813.70.95Os04g0519900AK071665.1-Hypothetical protein3e-2At4g09960STK (SEEDSTICK)O.I.H.G.S.X.
0.1813.70.95Os06g0714000AK069538.1-Protein of unknown function UPF0183 family protein1e-6At3g51130unknown proteinO.I.H.G.S.X.
0.116.50.95Os06g0103500AK060849.1-Acyl-CoA oxidase (EC 1.3.3.6)1e-50At4g16760ACX1 (ACYL-COA OXIDASE 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
44.399.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.897.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.097.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2501GO:0006635A fatty acid oxidation process that results in the complete oxidation of a long-chain fatty acid. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and occurs by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A; the cycle continues until only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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