Co-expression analysis

Gene ID Os11g0211300
Gene name
Homology with ArabidopsisSimilar to At4g21010: transcription initiation factor-related (HF=4e+0)
Module size 11 genes
NF 0.25
%ile 24.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7491.40.83Os11g0211300AK072173.1-NBS-LRR disease resistance protein homologue(Fragment)4e+0At4g21010transcription initiation factor-relatedO.I.H.G.S.X.
0.4762.30.87Os02g0223300AK068568.1-Conserved hypothetical protein2e-1At2g36026-O.I.H.G.S.X.
0.4558.80.85Os02g0486400AK109580.1--7e-1At2g43950OEP37O.I.H.G.S.X.
0.4051.10.87Os06g0271900AK069609.1-Conserved hypothetical protein5e-1At3g17420GPK1O.I.H.G.S.X.
0.2625.60.88Os01g0774200AK120412.1--8e-1At1g13430ST4C (SULFOTRANSFERASE 4C)O.I.H.G.S.X.
0.2219.40.85Os12g0569700AK062695.1-Hypothetical protein1e-93At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)O.I.H.G.S.X.
0.2016.50.85Os06g0621600AK102049.1-Disease resistance protein family protein2e+0At3g29160AKIN11 (Arabidopsis SNF1 kinase homolog 11)O.I.H.G.S.X.
0.2016.50.88Os02g03308009630.m02175-Conserved hypothetical protein4e-1At2g34340unknown proteinO.I.H.G.S.X.
0.1915.10.83Os08g04842009636.m03794-Zn-finger, RING domain containing protein7e-1At2g17420NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A)O.I.H.G.S.X.
0.1510.30.86Os06g0621500AK120647.1-Disease resistance protein family protein2e-1At1g02500SAM1 (S-ADENOSYLMETHIONINE SYNTHETASE 1)O.I.H.G.S.X.
0.149.30.87Os01g0967400NM_189417.1-Conserved hypothetical protein3e+0At1g06510unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
123.9100.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
87.6100.0GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
36.599.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.696.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.496.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.496.8GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.396.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.396.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.196.6GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.096.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0141GO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.Link to AmiGO
0.0121GO:0006915A form of programmed cell death that begins when a cell receives internal or external signals that trigger the activity of proteolytic caspases, proceeds through a series of characteristic stages typically including rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), and plasma membrane blebbing (but maintenance of its integrity until the final stages of the process), and ends with the death of the cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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