Co-expression analysis

Gene ID Os11g0188700
Gene name
Homology with ArabidopsisSimilar to At4g11870: unknown protein (HF=2e-1)
Module size 6 genes
NF 0.66
%ile 88.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.99Os11g01887009639.m00801--2e-1At4g11870unknown proteinO.I.H.G.S.X.
0.7391.10.99Os02g07730009630.m05270--4e+0At3g29140unknown proteinO.I.H.G.S.X.
0.6181.20.99Os11g02851009639.m01677--8e+0At5g16140peptidyl-tRNA hydrolase family proteinO.I.H.G.S.X.
0.6079.70.99Os04g02987009632.m02154-Conserved hypothetical protein2e+0At5g64400-O.I.H.G.S.X.
0.5068.00.99Os07g02809009635.m01818--3e+1At5g2354026S proteasome regulatory subunit, putativeO.I.H.G.S.X.
0.4253.90.99Os07g01112509635.m00108--3e+0At5g43970TOM22-V (TRANSLOCASE OF OUTER MEMBRANE 22-V)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.899.2GSM195220stigma 3, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
19.299.0GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.698.9GSM195219stigma 2, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
16.398.8GSM195218stigma 1, biological rep1GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
11.398.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage