Co-expression analysis

Gene ID Os11g0186200
Gene name
Homology with ArabidopsisSimilar to At1g01520: myb family transcription factor (HF=1e+0)
Module size 7 genes
NF 0.31
%ile 33.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6181.20.93Os11g0186200BI806335-Aldehyde dehydrogenase (EC 1.2.1.3)1e+0At1g01520myb family transcription factorO.I.H.G.S.X.
0.5573.70.93Os01g0803200AK121632.1-Cysteine proteinase inhibitor-I (Oryzacystatin-I)1e+0At2g40880ATCYSA (CYSTATIN A)O.I.H.G.S.X.
0.4355.40.93Os02g0817700AY224469.1-Acetyl-CoA acyltransferase (3-ketoacyl-coathiolase) (EC 2.3.1.16)5e-9At1g04710PKT4 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 4)O.I.H.G.S.X.
0.4253.90.92Os05g0545000AK066240.1-Phosphatidylinositol transfer-like protein IV5e-9At2g18180SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeO.I.H.G.S.X.
0.3134.50.93Os12g0623500CB629004-Cationic amino acid transporter-like protein3e-17At1g58030CAT2 (CATIONIC AMINO ACID TRANSPORTER 2)O.I.H.G.S.X.
0.2727.50.94Os02g0293500CB645264-CLP protease regulatory subunit CLPX precursor1e-33At5g53350CLPXO.I.H.G.S.X.
0.105.70.93Os05g0310500AK101093.1-Cathepsin B (Fragment)1e-33At1g02300cathepsin B-like cysteine protease, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.598.9GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.098.7GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.598.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.498.7GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.898.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.398.6GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.298.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.198.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0571GO:0006260The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA.Link to AmiGO
0.0291GO:0015031The directed movement of proteins into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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