Co-expression analysis

Gene ID Os11g0152900
Gene name
Homology with ArabidopsisSimilar to At1g71100: RSW10 (RADIAL SWELLING 10) (HF=1e-1)
Module size 8 genes
NF 0.10
%ile 7.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5573.70.82Os11g0152900AK109321.1-Hypothetical protein1e-1At1g71100RSW10 (RADIAL SWELLING 10)O.I.H.G.S.X.
0.4355.40.82Os08g0495800AK067229.1-Raffinose synthase family protein3e-26At1g55740AtSIP1 (Arabidopsis thaliana seed imbibition 1)O.I.H.G.S.X.
0.4051.10.82Os07g0290200AK062503.1-Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein1e+0At5g43000unknown proteinO.I.H.G.S.X.
0.116.50.82Os12g0611100AK066826.1-SRKb2e-5At1g16670protein kinase family proteinO.I.H.G.S.X.
0.105.70.77Os10g0552400AK121815.1-U box domain containing protein7e-1At3g62340WRKY68O.I.H.G.S.X.
0.094.90.80Os06g0670300AK070966.1-Myb, DNA-binding domain containing protein4e-2At2g02060transcription factorO.I.H.G.S.X.
0.042.00.82Os06g0168500AK100316.1-Syntaxin-like protein (Fragment)3e-6At3g03800SYP131 (SYNTAXIN OF PLANTS 131)O.I.H.G.S.X.
0.031.40.79Os05g01831009633.m00809-WRKY transcription factor 675e-7At5g26170WRKY50O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.397.9GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.197.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.097.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.997.0GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.396.7GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0201GO:0006886The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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