Co-expression analysis

Gene ID Os11g0151500
Gene name
Homology with ArabidopsisSimilar to At5g28440: unknown protein (HF=2e-1)
Module size 6 genes
NF 0.37
%ile 42.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7793.10.86Os11g0151500AK102457.1-Major facilitator superfamily protein2e-1At5g28440unknown proteinO.I.H.G.S.X.
0.6181.20.89Os02g0650300AK063464.1-Oligopeptide transporter OPT superfamily protein4e-9At4g24120YSL1 (YELLOW STRIPE LIKE 1)O.I.H.G.S.X.
0.5371.30.87Os03g0307300AB021746.2-Nicotianamine synthase 1 (EC 2.5.1.43)(S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-methionine 3-amino-3-carboxypropyltransferase 1) (HvNAS1)7e-1At1g03210phenazine biosynthesis PhzC/PhzF family proteinO.I.H.G.S.X.
0.5371.30.87Os03g0307200AB023818.1-Nicotianamine synthase 1 (EC 2.5.1.43)(S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-methionine 3-amino-3-carboxypropyltransferase 1) (HvNAS1)7e-1At5g49170unknown proteinO.I.H.G.S.X.
0.1813.70.86Os10g0455100CA758094-Eggshell protein family protein9e-2At5g39140unknown proteinO.I.H.G.S.X.
0.1712.60.87Os04g0423800AK108989.1-Peroxidase precursor (EC 1.11.1.7)3e-3At1g44970peroxidase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.597.9GSM302918leaf_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
7.597.5GSM302919leaf_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
6.497.2GSM116398Seedling_Control_rep2GSE5167Rice seedling hormone treatmentLink to GEO
6.197.1GSM116402Seedling_BAP treated_rep2GSE5167Rice seedling hormone treatmentLink to GEO
5.897.0GSM281585Rice Zhonghua11, biological rep3GSE11175Comparison of transcriptome profile between wild-type and dst mutant plantsLink to GEO
5.596.8GSM116195Seedling_Control_rep1GSE5167Rice seedling hormone treatmentLink to GEO
5.396.7GSM116400Seedling_IAA treated_rep2GSE5167Rice seedling hormone treatmentLink to GEO
5.096.6GSM281584Rice Zhonghua11, biological rep2GSE11175Comparison of transcriptome profile between wild-type and dst mutant plantsLink to GEO
4.896.5GSM359908IR29 root, control, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stressLink to GEO
4.796.4GSM154947Leaf_DMSO-treatment_30min_replicate 3GSE6719Cytokinin responsive genes in riceLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2352GO:0006826The directed movement of iron (Fe) ions into, out of, within or between cells.Link to AmiGO
0.0221GO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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