Co-expression analysis

Gene ID Os10g0580900
Gene name
Homology with ArabidopsisSimilar to At4g25030: unknown protein (HF=5e-8)
Module size 6 genes
NF 0.69
%ile 91.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.92Os10g0580900AK072734.1-Conserved hypothetical protein5e-8At4g25030unknown proteinO.I.H.G.S.X.
0.7189.60.90Os02g0126400AF194413.1-Protein kinase CPK16e-30At2g17890CPK16O.I.H.G.S.X.
0.6079.70.92Os03g0285800AF332873.1-MAP kinase 1 (MAP kinase MAPK5a)8e-4At2g43790ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6)O.I.H.G.S.X.
0.5371.30.90Os02g0165100AK066645.1-Protein kinase domain containing protein2e-4At2g35620FEI2 (FEI 2)O.I.H.G.S.X.
0.5068.00.92Os03g0241300AK072703.1-Hypothetical protein1e+0At3g49010ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1)O.I.H.G.S.X.
0.4458.10.95Os01g0908700AK120427.1-Heterogeneous nuclear ribonucleoprotein A2 homolog1 (hnRNP A2(A))2e-17At1g67800copine-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.997.8GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
5.796.9GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.696.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.596.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.296.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.196.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.795.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.795.6GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the grape gene, 1615923_at, orthologous to the query gene, Os10g0580900

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4057.71615923_atAt4g25030hypothetical protein LOC100259846-8e-8At4g25030unknown proteinO.I.H.G.S.X.
0.5779.81616263_s_atAt4g25030hypothetical protein LOC100253792-4e-2At3g03870unknown proteinO.I.H.G.S.X.
0.4464.11612198_atAt4g25030hypothetical protein LOC100251901-9e-14At2g24100unknown proteinO.I.H.G.S.X.
0.3853.61609922_s_atAt4g25030hypothetical protein LOC100260685-2e+0At4g15910ATDI21 (ARABIDOPSIS THALIANA DROUGHT-INDUCED 21)O.I.H.G.S.X.
0.3650.71609402_atAt4g25030hypothetical protein LOC100267606-1e-30At4g02280SUS3 (sucrose synthase 3)O.I.H.G.S.X.
0.2734.01615346_atAt4g25030hypothetical protein LOC100246049-2e-7At1g72160SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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