Gene ID | Os10g0564800 |
Gene name | |
Homology with Arabidopsis | Similar to At5g47100: CBL9 (HF=7e-6) |
Module size | 8 genes |
NF | 0.40 |
%ile | 47.9 |
VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0.52 | 69.6 | 0.96 | Os10g0564800 | CA766884 | - | Calcium-binding EF-hand domain containing protein | 7e-6 | At5g47100 | CBL9 | O.I. | H.G. | S.X. | |
0.42 | 53.9 | 0.97 | Os10g0397200 | CA759319 | - | Winged helix DNA-binding domain containing protein | 4e-1 | Atcg01070 | - | O.I. | H.G. | S.X. | |
0.38 | 46.9 | 0.97 | Os03g0852200 | AK068059.1 | - | Der1-like domain containing protein | 4e-30 | At4g21810 | DER2.1 (DERLIN-2.1) | O.I. | H.G. | S.X. | |
0.35 | 41.7 | 0.96 | Os01g0948300 | AK102153.1 | - | Cellular retinaldehyde-binding)/triple function,C-terminal domain containing protein | 9e+0 | At3g30370 | - | O.I. | H.G. | S.X. | |
0.35 | 41.7 | 0.96 | Os01g0507500 | AK102891.1 | - | Conserved hypothetical protein | 2e-1 | At1g71080 | unknown protein | O.I. | H.G. | S.X. | |
0.32 | 36.3 | 0.97 | Os01g0857700 | AK066959.1 | - | Cell cycle control protein cwf14 | 2e-19 | At4g21110 | G10 family protein | O.I. | H.G. | S.X. | |
0.31 | 34.5 | 0.97 | Os06g0264300 | AK061556.1 | - | UV excision repair protein Rad23 family protein | 1e-12 | At3g02540 | RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3) | O.I. | H.G. | S.X. | |
0.30 | 32.7 | 0.97 | Os11g0433200 | AK067867.1 | - | Peptidase A22B, minor histocompatibility antigenH13 family protein | 5e-3 | At1g01650 | aspartic-type endopeptidase/ peptidase | O.I. | H.G. | S.X. |
Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
---|---|---|---|---|---|---|
13.9 | 98.5 | GSM377082 | Genomic DNA - 45 day old leaf sample - mutant g9799 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | ![]() |
13.9 | 98.5 | GSM377077 | Genomic DNA - 45 day old leaf sample - mutant g6489 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | ![]() |
12.9 | 98.4 | GSM377085 | Genomic DNA - 45 day old leaf sample - mutant f2045 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | ![]() |
12.8 | 98.4 | GSM377075 | Genomic DNA - 45 day old leaf sample - mutant g650 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | ![]() |
12.8 | 98.4 | GSM422674 | Musa_DNA_RICE | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | ![]() |
12.5 | 98.3 | GSM377080 | Genomic DNA - 45 day old leaf sample - mutant g6728 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | ![]() |
12.4 | 98.3 | GSM377070 | Genomic DNA - 45 day old leaf sample - mutant d1 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | ![]() |
12.2 | 98.3 | GSM377076 | Genomic DNA - 45 day old leaf sample - mutant g6485 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | ![]() |
11.8 | 98.3 | GSM377074 | Genomic DNA - 45 day old leaf sample - mutant g282 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | ![]() |
11.7 | 98.2 | GSM377078 | Genomic DNA - 45 day old leaf sample - mutant g6603 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | ![]() |
SF | Genes | GO ID | Process Name | Link to AmiGO |
---|---|---|---|---|
0.105 | 1 | GO:0006289 | A DNA repair process in which a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts). | ![]() |
0.033 | 1 | GO:0006464 | The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification). | ![]() |
Arabidopsis_thaliana |
Glycine_max |
Hordeum_vulgare |
Populus_trichocarpa |
Triticum_aestivum |
Vitis_vinifera |
Zea_mays |
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