Co-expression analysis

Gene ID Os10g0554100
Gene name
Homology with ArabidopsisSimilar to At2g31030: ORP1B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1B) (HF=8e-36)
Module size 8 genes
NF 0.35
%ile 39.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4458.10.94Os10g0554100AK071048.1-Oxysterol-binding protein family protein8e-36At2g31030ORP1B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1B)O.I.H.G.S.X.
0.5068.00.95Os03g0278300AK071965.1-Transcriptional coactivator-like protein6e-12At5g02530RNA and export factor-binding protein, putativeO.I.H.G.S.X.
0.4458.10.94Os01g0622600CB642720-Calcium-dependent protein kinase2e-23At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)O.I.H.G.S.X.
0.4458.10.95Os03g0274000AK060769.1-Oxysterol-binding protein family protein1e-24At5g02100UNE18 (UNFERTILIZED EMBRYO SAC 18)O.I.H.G.S.X.
0.4458.10.96Os01g0510100CB656690-MAP kinase kinase 15e-30At5g56580MKK6 (MAP KINASE KINASE 6)O.I.H.G.S.X.
0.3338.80.96Os08g0157900AK065294.1-No apical meristem (NAM) protein domain containingprotein6e-6At5g18270ANAC087O.I.H.G.S.X.
0.2219.40.96Os03g0280000AK120269.1-ABC transporter, transmembrane region domaincontaining protein2e-72At3g55320PGP20 (P-GLYCOPROTEIN 20)O.I.H.G.S.X.
0.116.50.95Os05g0511400AK101120.1-Protein kinase GhCLK1 (Fragment)3e-41At4g14350protein kinase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
33.499.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.798.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.897.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.796.9GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2001GO:0008202The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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