Co-expression analysis

Gene ID Os10g0539900
Gene name
Homology with ArabidopsisSimilar to At4g35300: TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) (HF=1e-22)
Module size 6 genes
NF 0.44
%ile 55.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5978.00.96Os10g0539900AK102640.1-Sugar transporter family protein1e-22At4g35300TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2)O.I.H.G.S.X.
0.6079.70.97Os01g0300200AK099208.1-ATP:citrate lyase4e-121At5g49460ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2)O.I.H.G.S.X.
0.6079.70.97Os03g0854100AK067615.1-ARF GAP-like zinc finger-containing protein ZIGA2(Fragment)4e-12At2g35210RPA (ROOT AND POLLEN ARFGAP)O.I.H.G.S.X.
0.4458.10.98Os08g0554900AK072840.1-Nonaspanin (TM9SF) family protein2e-39At5g10840endomembrane protein 70, putativeO.I.H.G.S.X.
0.2524.10.97Os03g0237000AK064791.1-Nonaspanin (TM9SF) family protein3e-47At1g14670endomembrane protein 70, putativeO.I.H.G.S.X.
0.1813.70.97Os02g0722300AK064958.1-Nonaspanin (TM9SF) family protein6e-21At4g12650-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
43.199.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
24.299.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.998.0GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1431GO:0043087Any process that modulates the rate of GTP hydrolysis by a GTPase.Link to AmiGO
0.0431GO:0008643The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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