Co-expression analysis

Gene ID Os10g0539700
Gene name
Homology with ArabidopsisSimilar to At2g11890: adenylate cyclase (HF=1e+0)
Module size 6 genes
NF 0.22
%ile 20.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.91Os10g0539700AK120628.1-Conserved hypothetical protein1e+0At2g11890adenylate cyclaseO.I.H.G.S.X.
0.3541.70.92Os02g0589000AK066288.1-Lecithin:cholesterol acyltransferase familyprotein8e-1At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.
0.2321.20.93Os08g0101700AK061172.1-Cytochrome b5611e-1At1g13930-O.I.H.G.S.X.
0.1510.30.95Os10g0530500AF402800.1-Glutathione S-transferase, C-terminal domaincontaining protein1e-1At3g09270ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8)O.I.H.G.S.X.
0.138.20.92Os06g0254300AK066241.1-Caleosin related family protein8e-3At1g23240caleosin-related family proteinO.I.H.G.S.X.
0.116.50.93Os12g0271700AK110824.1-Solanesyl diphosphate synthase1e-18At1g17050SPS2 (Solanesyl diphosphate synthase 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.798.1GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.696.9GSM159219Seed (S5, 21 - 29 dap), biological rep 1GSE6893Expression data for reproductive development in riceLink to GEO
5.596.8GSM159221Seed (S5, 21 - 29 dap), biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO
4.896.5GSM262009IAC165, 11 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthicaLink to GEO
4.796.4GSM240996Zhonghua11 7 DAF, biological replicate 3GSE9498Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stageLink to GEO
4.696.3GSM159216Seed (S4, 11 - 20 dap), biological rep 1GSE6893Expression data for reproductive development in riceLink to GEO
4.496.2GSM262021Nipponbare, 11 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthicaLink to GEO
4.396.1GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
4.296.0GSM159220Seed (S5, 21 - 29 dap), biological rep 2GSE6893Expression data for reproductive development in riceLink to GEO
4.196.0GSM240995Zhonghua11 7 DAF, biological replicate 2GSE9498Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stageLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0441GO:0006629The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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