Co-expression analysis

Gene ID Os10g0516900
Gene name
Homology with ArabidopsisSimilar to At4g33130: - (HF=6e+0)
Module size 13 genes
NF 0.32
%ile 34.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.60.81Os10g0516900AK107070.1-Conserved hypothetical protein6e+0At4g33130-O.I.H.G.S.X.
0.5371.30.91Os02g0722400AK070030.1-Amino acid transporter c (Fragment)2e-4At5g23810AAP7O.I.H.G.S.X.
0.4762.30.87Os10g0521500AK105796.1-Esterase/lipase/thioesterase domain containingprotein3e+0At5g02750zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4660.90.90Os08g0441500AK102061.1-Cinnamoyl-CoA reductase2e+0At1g15950CCR1 (CINNAMOYL COA REDUCTASE 1)O.I.H.G.S.X.
0.4253.90.87Os12g0145400AK063322.1-Protein of unknown function DUF231 domaincontaining protein2e-8At5g19160unknown proteinO.I.H.G.S.X.
0.4253.90.89Os12g0454800AY572461.1-Histidine kinase7e-3At5g10530lectin protein kinase, putativeO.I.H.G.S.X.
0.3948.30.88Os08g0176900AK107028.1--1e+0At5g17080cathepsin-relatedO.I.H.G.S.X.
0.3846.90.89Os09g0532900AK106873.1-Myb, DNA-binding domain containing protein6e-32At4g22680MYB85 (myb domain protein 85)O.I.H.G.S.X.
0.2931.10.87Os06g0717200AK111824.1-Leucine-rich repeat/receptor protein kinaseprecursor7e-12At3g49670BAM2 (BARELY ANY MERISTEM 2)O.I.H.G.S.X.
0.2219.40.88Os06g0488600AK058968.1-Hypothetical protein5e-24At3g27870haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.2016.50.89Os10g0479700AK109405.2-Conserved hypothetical protein6e-8At2g28315-O.I.H.G.S.X.
0.1510.30.86Os05g0489900AK070533.1-Calcium/calmodulin-dependent protein kinase2e-5At4g09570CPK4O.I.H.G.S.X.
0.1510.30.85Os03g0722500AK099926.1-Glycoside hydrolase, family 17 protein1e-3At2g16230catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundsO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.598.2GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.097.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.597.5GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.897.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.897.3GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.796.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.596.8GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1431GO:0010080Any process involved in maintaining the size and shape of a floral meristem.Link to AmiGO
0.1431GO:0048833Any process that modulates the number of floral organs formed in a floral whorl.Link to AmiGO
0.0801GO:0009405The set of specific processes that generate the ability of an organism to cause disease in another.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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