Co-expression analysis

Gene ID Os10g0512700
Gene name
Homology with ArabidopsisSimilar to At4g34660: SH3 domain-containing protein 2 (SH3P2) (HF=3e-9)
Module size 6 genes
NF 0.50
%ile 66.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5573.70.96Os10g0512700AK067223.1-SH3 domain-containing protein 33e-9At4g34660SH3 domain-containing protein 2 (SH3P2)O.I.H.G.S.X.
0.7391.10.97Os08g0162000BX901451-Nonaspanin (TM9SF) family protein9e-35At2g01970endomembrane protein 70, putativeO.I.H.G.S.X.
0.4458.10.97Os05g0154700AK064328.1-Kinesin heavy chain (Fragment)5e-18At3g16630KINESIN-13AO.I.H.G.S.X.
0.4458.10.97Os09g0541900AB031299.1-Proteasome component region PCI domain containingprotein1e-24At1g20200EMB2719 (EMBRYO DEFECTIVE 2719)O.I.H.G.S.X.
0.4051.10.97Os03g0113800AK065925.1-ARM repeat fold domain containing protein6e-11At5g41950bindingO.I.H.G.S.X.
0.2524.10.97Os02g0722300AK064958.1-Nonaspanin (TM9SF) family protein6e-21At4g12650-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.997.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.497.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.997.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.396.7GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.196.6GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.196.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the maize gene, Zm.3147.1.A1_at, orthologous to the query gene, Os10g0512700

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8395.6Zm.3147.1.A1_atAt4g34660Hypothetical protein LOC100191269-2e-10At4g34660SH3 domain-containing protein 2 (SH3P2)O.I.H.G.S.X.
0.5065.7Zm.17003.1.S1_atAt4g34660DNA binding protein-3e-1At5g47710C2 domain-containing proteinO.I.H.G.S.X.
0.4455.7Zm.7091.1.A1_atAt4g34660Chlorophyll a/b-binding apoprotein CP24 precursor-3e-15At1g15820LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6)O.I.H.G.S.X.
0.2318.6Zm.3147.1.S1_atAt4g34660hypothetical protein LOC100191269-2e-10At4g34660SH3 domain-containing protein 2 (SH3P2)O.I.H.G.S.X.
0.083.4Zm.6219.1.A1_atAt4g34660--6e+0At4g29035-O.I.H.G.S.X.
0.041.5Zm.103.1.A1_atAt4g34660gamma-tubulin-1e-83At3g61650TUBG1 (GAMMA-TUBULIN)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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