Co-expression analysis

Gene ID Os10g0510400
Gene name
Homology with ArabidopsisSimilar to At1g33170: dehydration-responsive family protein (HF=1e-3)
Module size 7 genes
NF 0.14
%ile 11.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.60.92Os10g0510400AK100601.1-Putative methyltransferase DUF248 family protein1e-3At1g33170dehydration-responsive family proteinO.I.H.G.S.X.
0.4051.10.94Os08g0525000AK103220.1-Ras GTPase family protein1e-41At2g43130ARA4O.I.H.G.S.X.
0.3338.80.95Os01g0883900AK119636.1-Putative methyltransferase DUF248 family protein2e-12At5g64030dehydration-responsive protein-relatedO.I.H.G.S.X.
0.2727.50.93Os05g0218400CB680782-Protein kinase domain containing protein4e-18At3g24550ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1)O.I.H.G.S.X.
0.2321.20.93Os03g0300000AK060863.1-The start codon is not identified.1e-14At3g62720XT1 (XYLOSYLTRANSFERASE 1)O.I.H.G.S.X.
0.138.20.93Os10g0477100AK067258.1-Ankyrin-like protein5e-43At4g14360dehydration-responsive protein-relatedO.I.H.G.S.X.
0.042.00.93Os06g0561200AK120422.1-Potassium/proton antiporter-like protein5e-31At2g19600ATKEA4O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.998.7GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.598.5GSM195220stigma 3, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
12.198.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.198.3GSM195218stigma 1, biological rep1GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
11.998.3GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.298.2GSM195219stigma 2, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
11.098.2GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.898.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0361GO:0007264Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.Link to AmiGO
0.0291GO:0015031The directed movement of proteins into, out of, within or between cells.Link to AmiGO
0.0201GO:0006886The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage