Co-expression analysis

Gene ID Os10g0502500
Gene name
Homology with ArabidopsisSimilar to At3g48890: ATMP2 (HF=4e-14)
Module size 6 genes
NF 0.53
%ile 70.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.70.94Os10g0502500AK061824.1-Cytochrome b5 domain containing protein4e-14At3g48890ATMP2O.I.H.G.S.X.
0.7391.10.93Os03g0169900AK063222.1-Conserved hypothetical protein4e-1At5g64850unknown proteinO.I.H.G.S.X.
0.6079.70.94Os10g0363600AK111523.1-Cyclin-like F-box domain containing protein4e-3At1g22040kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.4660.90.95Os02g0830100AK065077.1-Oligopeptidase A7e-24At5g65620peptidase M3 family protein / thimet oligopeptidase family proteinO.I.H.G.S.X.
0.4458.10.95Os06g0728500AK099928.1-Hypothetical protein2e-2At1g70190ribosomal protein L12 family proteinO.I.H.G.S.X.
0.2117.90.95Os02g0773300AK071811.1-Pyridoxal phosphate-dependent deaminase familyprotein3e-12At1g48420D-CDES (D-CYSTEINE DESULFHYDRASE)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.298.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.397.9GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0391GO:0006520The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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