Co-expression analysis

Gene ID Os10g0483900
Gene name
Homology with ArabidopsisSimilar to At3g55880: unknown protein (HF=2e+0)
Module size 42 genes
NF 0.21
%ile 19.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.98100.00.91Os10g0483900NM_197061.1-Conserved hypothetical protein2e+0At3g55880unknown proteinO.I.H.G.S.X.
0.3440.00.93Os05g0455500D49714.1-Delta 1-pyrroline-5-carboxylate synthetase (P5CS)[Includes: Glutamate 5-kinase (EC 2.7.2.11)(Gamma-glutamyl kinase) (GK)1e-10At3g55610P5CS2 (DELTA 1-PYRROLINE-5-CARBOXYLATE SYNTHASE 2)O.I.H.G.S.X.
0.3440.00.93Os01g0750800AK063860.1-Conserved hypothetical protein2e-2At3g44550FAR5 (FATTY ACID REDUCTASE 5)O.I.H.G.S.X.
0.2931.10.94Os03g0285700AY254495.1-Ascorbate peroxidase (EC 1.11.1.11) (Cytosolicascorbate peroxidase 1)3e-12At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.
0.2931.10.94Os11g0249900AK073005.1-Protein kinase domain containing protein3e-7At5g48380leucine-rich repeat family protein / protein kinase family proteinO.I.H.G.S.X.
0.2931.10.94Os02g0656500AK066420.1-DnaJ protein homolog (DNAJ-1)7e-17At3g44110ATJ3O.I.H.G.S.X.
0.2727.50.94Os01g0720300AK058236.1-NADH-ubiquinone oxidoreductase 20 kDa subunit,mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)(Complex I-20KD) (CI-20KD)2e-26At5g11770NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrialO.I.H.G.S.X.
0.2625.60.96Os05g0106600AK103340.1-Non-muscle actin0At5g09810ACT7 (ACTIN 7)O.I.H.G.S.X.
0.2625.60.93Os03g0417900AK103622.1-Vps52/Sac2 family protein2e-24At1g71270POK (POKY POLLEN TUBE)O.I.H.G.S.X.
0.2625.60.94Os10g0456400AK101916.1-Conserved hypothetical protein5e+0At5g23212-O.I.H.G.S.X.
0.2524.10.95Os01g0144000AK101834.1-Conserved hypothetical protein8e-10At5g65810unknown proteinO.I.H.G.S.X.
0.2422.40.93Os10g0510000AK101613.1-Actin 7 (Actin 2)0At3g12110ACT11 (actin-11)O.I.H.G.S.X.
0.2422.40.94Os05g0491100AF441190.1-Calmodulin1e-90At3g56800CAM3 (CALMODULIN 3)O.I.H.G.S.X.
0.2321.20.95Os03g0737900AU029507-Conserved hypothetical protein6e-1At4g21450vesicle-associated membrane family protein / VAMP family proteinO.I.H.G.S.X.
0.2219.40.93Os10g0378300AK059907.1-The start codon is not identified.3e-29At3g28860ABCB19O.I.H.G.S.X.
0.2219.40.94Os01g0358400NM_193994.1-40S ribosomal protein S41e-65At5g5842040S ribosomal protein S4 (RPS4D)O.I.H.G.S.X.
0.2219.40.95Os03g0202200AK121020.1-Porin-like protein3e+0At3g01280VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1)O.I.H.G.S.X.
0.2219.40.96Os02g0461900AK119466.1-Hypothetical protein3e-4At4g14905kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.2219.40.97Os07g0435100AB037153.1-26S proteasome subunit RPN127e-13At1g64520RPN12a (Regulatory Particle non-ATPase 12a)O.I.H.G.S.X.
0.2117.90.94Os12g0136200AK069493.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein6e-2At4g00830RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.2117.90.94Os07g0633600AK067310.1-Conserved hypothetical protein2e-8At4g08810SUB1O.I.H.G.S.X.
0.2117.90.96Os05g0553700AK103396.1-Syntaxin 71 (AtSYP71)2e-19At3g09740SYP71 (SYNTAXIN OF PLANTS 71)O.I.H.G.S.X.
0.2117.90.94Os11g0199600AK101774.1-Zn-finger, CCHC type domain containing protein7e-1At5g61890AP2 domain-containing transcription factor family proteinO.I.H.G.S.X.
0.2117.90.93Os09g0501200AK063752.1-60S ribosomal protein L32 (Ribosomal protein 49)8e-21At5g4643060S ribosomal protein L32 (RPL32B)O.I.H.G.S.X.
0.2016.50.94Os02g0317400AK061254.1-Clathrin adaptor complex, small chain familyprotein5e-4At4g08520clathrin adaptor complex small chain family proteinO.I.H.G.S.X.
0.2016.50.96Os04g0117100AK121763.1-Conserved hypothetical protein1e+0At4g03965protein binding / zinc ion bindingO.I.H.G.S.X.
0.1915.10.97Os12g0207300AF443601.1-Clathrin coat assembly protein AP17 (Clathrin coatassociated protein AP17) (Plasma membrane adaptor AP-2 17kDa protein) (HA2 17 kDa subunit) (Clathrin assemblyprotein 2 small chain)9e-55At1g47830clathrin coat assembly protein, putativeO.I.H.G.S.X.
0.1915.10.95Os07g0523100AK069083.1-60S ribosomal protein L44 (60S ribosomal proteinL41)2e-8At4g33510DHS2 (3-deoxy-d-arabino-heptulosonate 7-phosphate synthase)O.I.H.G.S.X.
0.1915.10.95Os03g0565100AK102421.1-OST3/OST6 family protein5e-5At1g61790OST3/OST6 family proteinO.I.H.G.S.X.
0.1813.70.95Os02g0167300D30717.1-Tubulin beta-3 chain (Beta-3 tubulin)3e-179At5g62700TUB3O.I.H.G.S.X.
0.1813.70.95Os06g0701100D12627.1-Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)1e-135At1g54270EIF4A-2O.I.H.G.S.X.
0.1712.60.96Os01g0928100AK120714.1-Conserved hypothetical protein5e-12At3g48860unknown proteinO.I.H.G.S.X.
0.1712.60.95Os12g0103300AU222596-Protein transport protein SEC61 beta subunit4e-3At5g60460sec61beta family proteinO.I.H.G.S.X.
0.1712.60.95Os07g0614500AK061069.1-Elongation factor 1-beta (EF-1-beta)6e-26At2g18110elongation factor 1-beta, putative / EF-1-beta, putativeO.I.H.G.S.X.
0.1611.30.96Os03g0576700AY323130.1-60S ribosomal protein L13 (BBC1 protein homolog)8e-31At5g2390060S ribosomal protein L13 (RPL13D)O.I.H.G.S.X.
0.1510.30.97Os04g0398500AK059519.1-Ubiquinol-cytochrome c reductase iron-sulfursubunit, mitochondrial precursor (EC 1.10.2.2) (Rieskeiron-sulfur protein) (RISP)7e-10At5g13430ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeO.I.H.G.S.X.
0.149.30.96Os08g0177700AK121665.1-U6 snRNA-associated Sm-like protein LSm78e-5At2g03870small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putativeO.I.H.G.S.X.
0.149.30.95Os04g0349500AK068316.1-40S ribosomal protein S84e-51At5g5924040S ribosomal protein S8 (RPS8B)O.I.H.G.S.X.
0.149.30.96Os03g0606200AB055076.1-Conserved hypothetical protein1e-21At3g46430unknown proteinO.I.H.G.S.X.
0.149.30.97Os07g0222800AK100823.1-Acyl carrier protein, mitochondrial precursor(ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)(MtACP-1)1e-1At2g44620MTACP-1 (MITOCHONDRIAL ACYL CARRIER PROTEIN 1)O.I.H.G.S.X.
0.116.50.96Os02g0727500AK121427.1-Conserved hypothetical protein3e-2At1g16810unknown proteinO.I.H.G.S.X.
0.105.70.96Os09g0541900AB031299.1-Proteasome component region PCI domain containingprotein1e-24At1g20200EMB2719 (EMBRYO DEFECTIVE 2719)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
23.999.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.998.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.598.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.298.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0411GO:0006820The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells.Link to AmiGO
0.0361GO:0006397Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.Link to AmiGO
0.0341GO:0006633The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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