Co-expression analysis

Gene ID Os10g0439700
Gene name
Homology with ArabidopsisSimilar to At3g53280: CYP71B5 (CYTOCHROME P450 71B5) (HF=8e-4)
Module size 6 genes
NF 0.01
%ile 0.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.86Os10g04397009638.m02608-Cytochrome P450 family protein8e-4At3g53280CYP71B5 (CYTOCHROME P450 71B5)O.I.H.G.S.X.
0.4051.10.82Os11g0450300AK059900.1-Hypothetical protein1e-1At5g40070-O.I.H.G.S.X.
0.2219.40.84Os03g08058009631.m05818-Rieske [2Fe-2S] region domain containing protein9e-4At4g25650ACD1-LIKE (ACD1-LIKE)O.I.H.G.S.X.
0.031.40.82Os08g01185009636.m00152-Auxin responsive SAUR protein family protein1e+0At3g03850auxin-responsive protein, putativeO.I.H.G.S.X.
0.031.40.84Os01g0211200NM_188398.1-Cytochrome P450 family protein1e-5At2g34500CYP710A1 (cytochrome P450, family 710, subfamily A, polypeptide 1)O.I.H.G.S.X.
-0.10.83Os01g0217500AK063270.1-DJ-1 family protein7e-1At2g46780RNA binding / nucleic acid binding / nucleotide bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.699.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.999.2GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.998.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.698.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.298.4GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.198.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0481GO:0009734The series of molecular signals generated in response to detection of auxin.Link to AmiGO
0.0481GO:0050896A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage