| Gene ID | Os10g0421800 |
| Gene name | |
| Homology with Arabidopsis | Similar to At5g49700: DNA-binding protein-related (HF=5e-1) |
| Module size | 20 genes |
| NF | 0.42 |
| %ile | 53.1 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.88 | 96.8 | 0.86 | Os10g0421800 | AK119359.1 | - | Protein prenyltransferase domain containingprotein | 5e-1 | At5g49700 | DNA-binding protein-related | O.I. | H.G. | S.X. | |
| 0.60 | 79.7 | 0.92 | Os01g0673800 | AK120641.1 | - | Conserved hypothetical protein | 2e-3 | At2g31040 | ATP synthase protein I -related | O.I. | H.G. | S.X. | |
| 0.51 | 68.7 | 0.90 | Os10g0111300 | CB638003 | - | TGF-beta receptor, type I/II extracellular regionfamily protein | 1e-3 | At1g69860 | proton-dependent oligopeptide transport (POT) family protein | O.I. | H.G. | S.X. | |
| 0.49 | 64.4 | 0.92 | Os01g0237100 | AK060943.1 | - | Phosphoglycerate/bisphosphoglycerate mutase familyprotein | 1e-1 | At4g00650 | FRI (FRIGIDA) | O.I. | H.G. | S.X. | |
| 0.48 | 63.7 | 0.90 | Os01g0676200 | AK070436.1 | - | Conserved hypothetical protein | 2e+0 | At4g13720 | inosine triphosphate pyrophosphatase, putative / HAM1 family protein | O.I. | H.G. | S.X. | |
| 0.47 | 62.3 | 0.87 | Os01g0810100 | AK071916.1 | - | Ribonuclease III domain containing protein | 3e-22 | At4g37510 | ribonuclease III family protein | O.I. | H.G. | S.X. | |
| 0.46 | 60.9 | 0.88 | Os10g0533100 | AK111957.1 | - | Conserved hypothetical protein | 5e-1 | At2g40020 | - | O.I. | H.G. | S.X. | |
| 0.43 | 55.4 | 0.91 | Os03g0158300 | AK066591.1 | - | Conserved hypothetical protein | 3e+0 | At1g07950 | surfeit locus protein 5 family protein / SURF5 family protein | O.I. | H.G. | S.X. | |
| 0.43 | 55.4 | 0.90 | Os03g0856100 | AK067137.1 | - | TPR-like domain containing protein | 1e+0 | At5g46730 | glycine-rich protein | O.I. | H.G. | S.X. | |
| 0.43 | 55.4 | 0.93 | Os04g0514400 | AK108112.1 | - | Peptidoglycan binding-like domain containingprotein | 4e-1 | At5g57070 | hydroxyproline-rich glycoprotein family protein | O.I. | H.G. | S.X. | |
| 0.41 | 52.4 | 0.88 | Os06g0136600 | AK069316.1 | - | Enolase 1 (EC 4.2.1.11) (2-phosphoglyceratedehydratase 1) (2-phospho- D-glycerate hydro-lyase 1) | 9e-47 | At2g36530 | LOS2 | O.I. | H.G. | S.X. | |
| 0.37 | 45.0 | 0.92 | Os02g0730800 | AK066980.1 | - | - | 1e-8 | At3g20930 | RNA recognition motif (RRM)-containing protein | O.I. | H.G. | S.X. | |
| 0.37 | 45.0 | 0.90 | Os04g0610500 | AK066289.1 | - | Peptidase M24, methionine aminopeptidase familyprotein | 8e-7 | At1g13270 | MAP1C (METHIONINE AMINOPEPTIDASE 1B) | O.I. | H.G. | S.X. | |
| 0.34 | 40.0 | 0.90 | Os08g0483200 | AK068161.1 | - | - | 2e-3 | At2g23320 | WRKY15 | O.I. | H.G. | S.X. | |
| 0.34 | 40.0 | 0.87 | Os01g0323300 | CA760263 | - | Conserved hypothetical protein | 3e-1 | At1g54200 | unknown protein | O.I. | H.G. | S.X. | |
| 0.33 | 38.8 | 0.94 | Os07g0548300 | NM_185739.1 | - | CRP1 | 4e-6 | At5g42310 | pentatricopeptide (PPR) repeat-containing protein | O.I. | H.G. | S.X. | |
| 0.33 | 38.8 | 0.91 | Os03g0769600 | AK100054.1 | - | ResB-like family protein | 7e-5 | At1g49380 | cytochrome c biogenesis protein family | O.I. | H.G. | S.X. | |
| 0.26 | 25.6 | 0.96 | Os11g0150100 | AK068167.1 | - | Phosphoglycerate/bisphosphoglycerate mutase familyprotein | 6e-2 | At5g22620 | phosphoglycerate/bisphosphoglycerate mutase family protein | O.I. | H.G. | S.X. | |
| 0.24 | 22.4 | 0.95 | Os03g0695500 | CB636267 | - | Protein of unknown function DUF1517 family protein | 1e+0 | At1g54520 | unknown protein | O.I. | H.G. | S.X. | |
| 0.24 | 22.4 | 0.93 | Os01g0618400 | NM_192814.1 | - | RNA helicase (Fragment) | 2e-20 | At5g63630 | DEAD box RNA helicase, putative | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 35.5 | 99.8 | GSM422674 | Musa_DNA_RICE | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 21.8 | 99.2 | GSM422672 | Drought | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 18.2 | 98.9 | GSM422676 | Control | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 11.2 | 98.2 | GSM377070 | Genomic DNA - 45 day old leaf sample - mutant d1 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 10.3 | 98.1 | GSM377084 | Genomic DNA - 45 day old leaf sample - mutant f1856 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 10.1 | 98.0 | GSM377081 | Genomic DNA - 45 day old leaf sample - mutant g7534 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 9.9 | 98.0 | GSM377078 | Genomic DNA - 45 day old leaf sample - mutant g6603 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 9.6 | 97.9 | GSM377077 | Genomic DNA - 45 day old leaf sample - mutant g6489 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 9.6 | 97.9 | GSM377075 | Genomic DNA - 45 day old leaf sample - mutant g650 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 9.3 | 97.9 | GSM377085 | Genomic DNA - 45 day old leaf sample - mutant f2045 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| SF | Genes | GO ID | Process Name | Link to AmiGO |
|---|---|---|---|---|
| 0.065 | 1 | GO:0006298 | A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination. |  |
| 0.035 | 1 | GO:0006396 | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. | |
| 0.033 | 1 | GO:0006096 | The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle. | |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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