Co-expression analysis

Gene ID Os10g0412000
Gene name
Homology with ArabidopsisSimilar to At1g59820: ALA3 (Aminophospholipid ATPase3) (HF=8e-45)
Module size 6 genes
NF 0.17
%ile 14.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.60.93Os10g0412000AK066864.1-Phospholipid-translocating P-type ATPase, flippasefamily protein8e-45At1g59820ALA3 (Aminophospholipid ATPase3)O.I.H.G.S.X.
0.4458.10.94Os10g0428200AK065193.1-Conserved hypothetical protein4e-1At3g45960ATEXLA3 (arabidopsis thaliana expansin-like a3)O.I.H.G.S.X.
0.1915.10.94Os12g0256300AK099579.1-Schizosaccharomyces pombe (Fragment)6e-43At1g80930MIF4G domain-containing protein / MA3 domain-containing proteinO.I.H.G.S.X.
0.1813.70.93Os06g0638000CB673746-Zn-finger, C-x8-C-x5-C-x3-H type domain containingprotein1e-11At1g21570zinc finger (CCCH-type) family proteinO.I.H.G.S.X.
0.116.50.94Os02g0782600AK059701.1-SAC domain protein 1 (FIG4-like protein AtFIG4)1e-11At1g22620ATSAC1 (suppressor of actin 1)O.I.H.G.S.X.
0.052.50.93Os01g0857000AK119434.1-Double-stranded RNA binding domain containingprotein6e-15At5g01270CPL2O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
47.299.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
30.599.7GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.197.7GSM159207Seed (S1, 0 - 2 dap), biological rep 1GSE6893Expression data for reproductive development in riceLink to GEO
7.597.5GSM195228EmbryoGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
6.397.2GSM159209Seed (S1, 0 - 2 dap), biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO
5.096.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.796.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.696.3GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
4.696.3GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.596.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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