Co-expression analysis

Gene ID Os10g0411700
Gene name
Homology with ArabidopsisSimilar to At3g10090: 40S ribosomal protein S28 (RPS28A) (HF=5e-3)
Module size 6 genes
NF 0.77
%ile 96.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.99Os10g0411700AK058209.1-Ribosomal protein S285e-3At3g1009040S ribosomal protein S28 (RPS28A)O.I.H.G.S.X.
0.8395.80.99Os01g0328400AK061988.1-Ubiquitin7e-66At2g47110UBQ6O.I.H.G.S.X.
0.7189.60.99Os03g0234200D12629.1-Ubiquitin fused to ribosomal protein L403e-45At3g52590UBQ1 (UBIQUITIN EXTENSION PROTEIN 1)O.I.H.G.S.X.
0.6787.20.99Os02g0717800AK105284.1-Ribosomal protein L31e domain containing protein3e-10At5g5671060S ribosomal protein L31 (RPL31C)O.I.H.G.S.X.
0.6079.70.99Os03g0424500AK104954.1-40S ribosomal protein S195e-10At5g6117040S ribosomal protein S19 (RPS19C)O.I.H.G.S.X.
0.5371.30.99Os05g0160200L31941.1-The start codon is not identified.6e-74At2g47110UBQ6O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.799.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.798.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.197.7GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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