Co-expression analysis

Gene ID Os10g0406300
Gene name
Homology with ArabidopsisSimilar to At2g34140: Dof-type zinc finger domain-containing protein (HF=5e-17)
Module size 6 genes
NF 0.18
%ile 15.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5978.00.85Os10g0406300AK068588.1-The start codon is not identified.5e-17At2g34140Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.4253.90.86Os09g0562700AK108733.1-Pre-pro-TPE4A protein precursor1e-1At3g54940-O.I.H.G.S.X.
0.138.20.87Os03g0626600AK066665.1-The start codon is not identified.8e-14At4g36860zinc ion bindingO.I.H.G.S.X.
0.138.20.87Os01g0214800AK065001.1-Lipolytic enzyme, G-D-S-L family protein5e-2At1g28590lipase, putativeO.I.H.G.S.X.
0.138.20.88Os01g0815400AK121388.1-Conserved hypothetical protein1e-1At3g42155catalytic/ hydrolase, hydrolyzing O-glycosyl compoundsO.I.H.G.S.X.
0.116.50.87Os02g0273700AK102828.1-VHS domain containing protein2e-8At4g32760protein transporterO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
41.999.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.798.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.097.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.697.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.097.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.997.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.796.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.596.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1541GO:0006891The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).Link to AmiGO
0.0201GO:0006886The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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