Co-expression analysis

Gene ID Os10g0405200
Gene name
Homology with ArabidopsisSimilar to At5g44610: MAP18 (Microtubule-associated Protein 18) (HF=5e+0)
Module size 26 genes
NF 0.43
%ile 53.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7088.40.99Os10g04052009638.m02264--5e+0At5g44610MAP18 (Microtubule-associated Protein 18)O.I.H.G.S.X.
0.5777.00.99Os06g05224009634.m03104--3e-1At1g50640ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3)O.I.H.G.S.X.
0.5371.30.99Os01g07801009629.m05600--1e+0At1g52180major intrinsic family protein / MIP family proteinO.I.H.G.S.X.
0.5168.70.99Os05g0297300AK067752.1-Hypothetical protein9e-1At1g03070glutamate bindingO.I.H.G.S.X.
0.5168.70.99Os10g0325500NM_195699.1--1e-1At1g32240KAN2 (KANADI 2)O.I.H.G.S.X.
0.5068.01.00Os10g0535400NM_197534.1--9e-1At2g43520ATTI2O.I.H.G.S.X.
0.4863.70.99Os02g03000009630.m01881-Conserved hypothetical protein6e+0At4g32924unknown proteinO.I.H.G.S.X.
0.4762.30.99Os02g03083009630.m01965--6e-2At1g28310Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.4762.30.99Os01g03371009629.m02267-Terpene synthase-like domain containing protein8e-1At2g02730-O.I.H.G.S.X.
0.4762.30.99Os10g04361009638.m02565--5e-1At2g35300late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing proteinO.I.H.G.S.X.
0.4660.91.00Os02g05835009630.m03564-Conserved hypothetical protein7e+0At5g64360DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.4660.90.99Os08g03898009636.m02993-FAR1 domain containing protein7e-2At3g58850PAR2 (PHY RAPIDLY REGULATED 2)O.I.H.G.S.X.
0.4458.10.99Os03g0596300CB633840-Endonuclease/exonuclease/phosphatase familyprotein6e+0At5g16950unknown proteinO.I.H.G.S.X.
0.4253.90.99Os03g03594009631.m02386--5e+0At1g76840unknown proteinO.I.H.G.S.X.
0.4152.40.99Os08g02652009636.m01653--6e-1At2g17780MCA2 (mid1-complementing activity 2)O.I.H.G.S.X.
0.4051.10.99Os09g02413009637.m00412--5e-1At1g34520long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family proteinO.I.H.G.S.X.
0.4051.10.99Os10g04346009638.m02552--2e+0At5g64850unknown proteinO.I.H.G.S.X.
0.3948.30.99Os07g0586400NM_187020.1--1e+0At3g58180PBS lyase HEAT-like repeat-containing proteinO.I.H.G.S.X.
0.3948.30.99Os04g01586009632.m00675--2e+0At4g24230ACBP3 (ACYL-COA-BINDING DOMAIN 3)O.I.H.G.S.X.
0.3846.90.99Os03g0567300NM_184757.1--2e+0At3g44940unknown proteinO.I.H.G.S.X.
0.3846.90.99Os08g03970009636.m03060--9e-1At1g11380unknown proteinO.I.H.G.S.X.
0.3745.00.99Os06g03132009634.m02029-SAM dependent carboxyl methyltransferase familyprotein9e+0At5g01610unknown proteinO.I.H.G.S.X.
0.3745.00.99Os11g06714009639.m04165--6e-1At4g28760unknown proteinO.I.H.G.S.X.
0.3338.80.99Os07g0430200BI305686-Hypothetical protein7e+0At4g18580unknown proteinO.I.H.G.S.X.
0.2831.10.99Os03g06531009631.m04352--5e-1At5g47970nitrogen regulation family proteinO.I.H.G.S.X.
0.2117.90.99Os06g05028009632.m02370-Hypothetical plant protein family protein6e-2At3g57320unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
34.899.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.599.0GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.098.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.998.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.698.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.598.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.098.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.498.5GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.298.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0171GO:0006278The process whereby new strands of DNA are synthesized, using RNA as a template for RNA-dependent DNA polymerases (e.g. reverse transcriptase) that synthesize the new strands.Link to AmiGO
0.0131GO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.Link to AmiGO
0.0111GO:0006915A form of programmed cell death that begins when a cell receives internal or external signals that trigger the activity of proteolytic caspases, proceeds through a series of characteristic stages typically including rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), and plasma membrane blebbing (but maintenance of its integrity until the final stages of the process), and ends with the death of the cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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