Co-expression analysis

Gene ID Os10g0365900
Gene name
Homology with ArabidopsisSimilar to At3g20070: TTN9 (TITAN9) (HF=6e+0)
Module size 6 genes
NF 0.69
%ile 92.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.99Os10g03659009638.m01861--6e+0At3g20070TTN9 (TITAN9)O.I.H.G.S.X.
0.7391.10.99Os09g0319800AK066759.1-Terpenoid cylases/protein prenyltransferasealpha-alpha toroid domain containing protein6e-1At4g19910Toll-Interleukin-Resistance (TIR) domain-containing proteinO.I.H.G.S.X.
0.6787.20.98Os01g08796009629.m06520--4e-1At5g60140transcriptional factor B3 family proteinO.I.H.G.S.X.
0.6787.20.99Os08g02628009636.m01637--7e-2At5g07110PRA1.B6 (PRENYLATED RAB ACCEPTOR 1.B6)O.I.H.G.S.X.
0.5371.30.99Os11g05013009639.m02775--4e-1At1g65541unknown proteinO.I.H.G.S.X.
0.4762.30.98Os10g03441009638.m01680--5e+0At5g05950MEE60 (maternal effect embryo arrest 60)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.499.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.198.7GSM174889H FR13 4 dpi rep 2 with array type rice from AffymetrixGSE7256Identification of rice genes differentially expressed upon virulent infection by Magnaporthe griseaLink to GEO
13.498.5GSM174886F FR13 4 dpi rep 1 with array type rice from AffymetrixGSE7256Identification of rice genes differentially expressed upon virulent infection by Magnaporthe griseaLink to GEO
12.898.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.497.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM278845WuYun3-RSV infected, biological rep2GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infectionLink to GEO
5.696.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.396.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.396.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage