Co-expression analysis

Gene ID	Os10g0365200
Gene name
Homology with Arabidopsis	Similar to At1g68870: unknown protein (HF=1e-1)
Module size	6 genes
NF	0.30
%ile	31.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	68.0	0.95	Os10g0365200	AK106938.1	-	Tau class GST protein 4	1e-1	At1g68870	unknown protein	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.50	68.0	0.97	Os01g0252600	NM_187867.1	-	Conserved hypothetical protein	6e-3	At4g01915	unknown protein	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.44	58.1	0.96	Os05g0393200	9633.m02996	-	Conserved hypothetical protein	4e-1	At3g06180	structural constituent of ribosome	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.36	44.0	0.96	Os01g0882400	AK108538.1	-	-	2e+0	At4g05070	unknown protein	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.19	15.1	0.95	Os03g0822500	NM_185164.1	-	-	1e+0	At2g01250	60S ribosomal protein L7 (RPL7B)	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.19	15.1	0.95	Os01g0892200	AU166872	-	Conserved hypothetical protein	5e-3	At1g27300	unknown protein	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.8	98.3	GSM159202	Inflorescence (P5, 15 - 22 cm), biological rep 2	GSE6893	Expression data for reproductive development in rice
9.3	97.9	GSM195224	Suspension cell	GSE7951	Genome-wide gene expression profiling of rice stigma
9.2	97.9	GSM159201	Inflorescence (P5, 15 - 22 cm), biological rep 1	GSE6893	Expression data for reproductive development in rice
9.2	97.9	GSM159198	Inflorescence (P4, 10 - 15 cm), biological rep 1	GSE6893	Expression data for reproductive development in rice
8.8	97.8	GSM377084	Genomic DNA - 45 day old leaf sample - mutant f1856	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.1	97.7	GSM422672	Drought	GSE16865	Heterologous microarrays for the study of drought stress in Musa
8.0	97.6	GSM377070	Genomic DNA - 45 day old leaf sample - mutant d1	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.2	97.4	GSM377073	Genomic DNA - 45 day old leaf sample - mutant d2943	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.1	97.4	GSM377071	Genomic DNA - 45 day old leaf sample - mutant d256	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.7	97.3	GSM377085	Genomic DNA - 45 day old leaf sample - mutant f2045	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF	Genes	GO ID	Process Name	Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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