Co-expression analysis

Gene ID Os10g0356366
Gene name
Homology with ArabidopsisSimilar to Atcg00510: - (HF=3e-30)
Module size 6 genes
NF 0.76
%ile 96.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4051.10.93Os10g0356366CR288737--3e-30Atcg00510-O.I.H.G.S.X.
0.8094.60.93Os01g07916009633.m03286-Ribulose bisphosphate carboxylase large chainprecursor (EC 4.1.1.39) (RuBisCO large subunit)4e-129Atcg00490-O.I.H.G.S.X.
0.7793.10.93Os01g0792400AK062797.1-Photosystem I assembly protein ycf42e-53Atcg00520-O.I.H.G.S.X.
0.7793.10.93Os10g0527100BI795990-Chloroplast ATP synthase a chain precursor (EC3.6.3.14) (ATPase subunit IV)2e+0At5g15850COL1 (constans-like 1)O.I.H.G.S.X.
0.7391.10.93Os06g0598500AK058623.1-Ribulose bisphosphate carboxylase large chainprecursor (EC 4.1.1.39) (RuBisCO large subunit)0Atcg00490-O.I.H.G.S.X.
0.6787.20.94Os04g0235600CR291556-ATP synthase B chain (EC 3.6.3.14) (Subunit I)2e-42Atcg00130-O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7391.10.91Os01g0789400NM_195997.1-Alpha subunit of RNA polymerase2e-50Atcg00740-O.I.H.G.S.X.
0.6787.20.96Os01g0749400AK067731.1-Glycosyl transferase, family 20 domain containingprotein2e-12At1g06410ATTPS7O.I.H.G.S.X.
0.6181.20.87Os12g0242800AK107948.1-TRAM, LAG1 and CLN8 homology domain containingprotein8e+0At3g23727SCRL12 (SCR-Like 12)O.I.H.G.S.X.
0.6079.70.84Os10g0415800AK066318.1-Acylamino acid-releasing enzyme4e-4At4g14570acylaminoacyl-peptidase-relatedO.I.H.G.S.X.
0.5068.00.89Os03g0248200AK070050.1-Cytochrome P450 family protein9e-1At3g26180CYP71B20O.I.H.G.S.X.
0.4762.30.81Os01g0117900CR284643-Nodulin-like protein 5NG41e+0At5g62750unknown proteinO.I.H.G.S.X.
0.4660.90.86Os06g0314600AK067321.1-Floral nectary-specific protein2e-1At1g15125S-adenosylmethionine-dependent methyltransferase/ methyltransferaseO.I.H.G.S.X.
0.4051.10.89Os02g0186400AK067643.1-Spectrin repeat containing protein1e+0At4g19270unknown proteinO.I.H.G.S.X.
0.4051.10.94Os01g0338600AK066580.1-Conserved hypothetical protein6e-29At2g43945unknown proteinO.I.H.G.S.X.
0.3338.80.86Os06g05529009634.m03404-Terminal flower1 (Fragment)3e-1At1g65480FT (FLOWERING LOCUS T)O.I.H.G.S.X.
0.3338.80.91Os05g0292600AK071967.1-Chloroplast 50S ribosomal protein L145e-68Atcg00780-O.I.H.G.S.X.
0.3338.80.92Os08g0566400AK067804.1-Carbohydrate kinase, PfkB family protein1e-12At4g28706pfkB-type carbohydrate kinase family proteinO.I.H.G.S.X.
0.3236.30.86Os11g0181700AK065928.1-Short-chain dehydrogenase Tic323e-1At1g08080ACA7 (ALPHA CARBONIC ANHYDRASE 7)O.I.H.G.S.X.
0.3236.30.88Os08g0224500AK106897.1-Glycoside hydrolase, family 17 protein3e-1At5g20870glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.3134.50.88Os05g0582800AK069785.1-Peptidase S10, serine carboxypeptidase familyprotein3e+0At1g15000scpl50 (serine carboxypeptidase-like 50)O.I.H.G.S.X.
0.2727.50.83Os10g0133600NM_194751.1-Protein kinase-like domain containing protein3e+0At4g21830methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinO.I.H.G.S.X.
0.2625.60.87Os11g0444000AK099588.1-UDP-glucosyltransferase BX82e-1At5g05870UGT76C1 (UDP-glucosyl transferase 76C1)O.I.H.G.S.X.
0.2625.60.89Os03g0131900AK099900.1-Chromo domain containing protein3e-3At2g47450CAO (CHAOS)O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
33.799.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
29.699.7GSM377083Genomic DNA - 45 day old leaf sample - mutant g6989GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
21.399.2GSM377079Genomic DNA - 45 day old leaf sample - mutant g6686GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
20.099.1GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
19.899.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.899.0GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
18.599.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.898.9GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.798.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.398.9GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0871GO:0006818The directed movement of hydrogen (H2 or H+), into, out of, within or between cells.Link to AmiGO
0.0631GO:0015992The directed movement of protons (hydrogen ions) into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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