Co-expression analysis

Gene ID Os10g0334500
Gene name
Homology with ArabidopsisSimilar to At1g07700: thioredoxin family protein (HF=2e-2)
Module size 6 genes
NF 0.75
%ile 96.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.84Os10g0334500NM_195796.1-Conserved hypothetical protein2e-2At1g07700thioredoxin family proteinO.I.H.G.S.X.
0.9198.90.90Os07g01749009635.m00735-Plant lipid transfer protein/Par allergen familyprotein5e+0At5g26890unknown proteinO.I.H.G.S.X.
0.8094.60.89Os01g0127000AK105526.1-Multicopper oxidase, type 1 domain containingprotein4e+0At5g02270ATNAP9O.I.H.G.S.X.
0.6181.20.89Os02g0791400AK062787.1-Cytochrome oxidase c, subunit VIb family protein6e+0At2g47910CRR6 (chlororespiratory reduction 6)O.I.H.G.S.X.
0.5676.30.85Os12g0455000AK111239.1-Conserved hypothetical protein1e+0At4g09450myb family transcription factorO.I.H.G.S.X.
0.5068.00.89Os01g0895300AK073544.1-Conserved hypothetical protein1e+1At5g16400ATF2O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
37.599.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
21.999.3GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.998.3GSM359921Pokkali root, control, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stressLink to GEO
10.798.1GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM359923Pokkali root, salt-treated, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stressLink to GEO
9.597.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM359919Pokkali root, control, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stressLink to GEO
8.497.7GSM359924Pokkali root, salt-treated, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stressLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1251GO:0006584The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine.Link to AmiGO
0.0531GO:0006869The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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