Co-expression analysis

Gene ID Os10g0327400
Gene name
Homology with ArabidopsisSimilar to At5g67190: AP2 domain-containing transcription factor, putative (HF=2e+0)
Module size 10 genes
NF 0.55
%ile 74.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6987.90.98Os10g03274009638.m01495--2e+0At5g67190AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.7189.60.98Os07g01042009635.m00040--4e+0At1g12090ELP (EXTENSIN-LIKE PROTEIN)O.I.H.G.S.X.
0.6483.40.98Os12g06399009640.m04362--2e-1At1g52827unknown proteinO.I.H.G.S.X.
0.5676.30.98Os07g06321009635.m04398--5e+0At5g01530chlorophyll A-B binding protein CP29 (LHCB4)O.I.H.G.S.X.
0.5676.30.98Os11g07042009639.m04471--8e-1At5g58005unknown proteinO.I.H.G.S.X.
0.5371.30.99Os05g03089009633.m02163--3e+0At4g22950AGL19 (AGAMOUS-LIKE 19)O.I.H.G.S.X.
0.4863.70.98Os03g06381009631.m04211--3e+0At2g22470AGP2 (ARABINOGALACTAN PROTEIN 2)O.I.H.G.S.X.
0.4458.10.98Os12g01158339640.m00142--1e+1At5g11280unknown proteinO.I.H.G.S.X.
0.4152.40.98Os05g04293009633.m03300--2e+0At5g18240MYR1 (MYb-related protein 1)O.I.H.G.S.X.
0.4051.10.98Os03g06224009631.m04085-Conserved hypothetical protein4e+0At5g05370ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.598.5GSM195220stigma 3, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
12.898.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.398.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.098.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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