CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os10g0195100

Gene name
Homology with Arabidopsis Similar to At5g35610: paired amphipathic helix repeat-containing protein (HF=4e-2)

Module size 7 genes

NF 0.38

%ile 45.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.57 77.0 0.85 Os10g0195100 NM_195334.1 - En/Spm-like transposon proteins family protein 4e-2 At5g35610 paired amphipathic helix repeat-containing protein O.I. H.G. S.X.
0.53 71.3 0.85 Os06g0616400 AK072464.1 - Conserved hypothetical protein 5e-1 At3g07220 transcriptional activator, putative O.I. H.G. S.X.
0.46 60.9 0.88 Os08g0535000 AK066324.1 - Conserved hypothetical protein 6e+0 At4g07940 unknown protein O.I. H.G. S.X.
0.44 58.1 0.91 Os08g0338000 AK068483.1 - Conserved hypothetical protein 2e-1 At1g68540 oxidoreductase family protein O.I. H.G. S.X.
0.38 46.9 0.86 Os08g0330800 AK107544.1 - - 2e+0 At2g34010 unknown protein O.I. H.G. S.X.
0.22 19.4 0.85 Os11g0586100 AK108746.1 - Protein kinase domain containing protein 2e-1 At3g63330 protein kinase family protein O.I. H.G. S.X.
0.19 15.1 0.85 Os09g0242600 AK072475.1 - Conserved hypothetical protein 1e-1 At4g16240 unknown protein O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
35.1 99.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
23.1 99.3 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
15.9 98.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.6 98.6 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.5 98.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.3 98.4 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.7 98.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.5 98.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.5 98.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.9 98.3 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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