Co-expression analysis

Gene ID Os10g0168600
Gene name
Homology with ArabidopsisSimilar to At2g14835: zinc finger (C3HC4-type RING finger) family protein (HF=6e-1)
Module size 13 genes
NF 0.51
%ile 67.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.60.98Os10g0168600NM_195037.1--6e-1At2g14835zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6181.20.99Os06g05428009634.m03318--8e-3At4g34560unknown proteinO.I.H.G.S.X.
0.5471.90.99Os01g0794500NM_190884.1-Protein translation factor SUI1 homolog (GOS2protein)8e-1At4g30300ATNAP15O.I.H.G.S.X.
0.5471.90.99Os11g0638200AY224587.1-Hypothetical protein8e-1At1g18800NRP2 (NAP1-RELATED PROTEIN 2)O.I.H.G.S.X.
0.5168.70.99Os03g01369669631.m00355--4e+0At5g43175basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.5068.00.99Os01g06588019629.m04500--6e+0At5g28050cytidine/deoxycytidylate deaminase family proteinO.I.H.G.S.X.
0.5068.00.99Os10g05145009638.m03307-Cytochrome P450 family protein8e-1At1g64930CYP89A7O.I.H.G.S.X.
0.4762.30.98Os06g01622009634.m00599--3e-1At2g18670zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4660.90.99Os02g04514009630.m02380--5e-2At3g46380unknown proteinO.I.H.G.S.X.
0.4458.10.99Os07g01448009635.m00451--1e+0At1g75950SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)O.I.H.G.S.X.
0.4458.10.99Os04g02806009632.m01942--8e-7At5g14180MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1)O.I.H.G.S.X.
0.4355.40.99Os01g06266019629.m04206--8e-2At3g44140unknown proteinO.I.H.G.S.X.
0.4152.40.99Os11g0539300NM_189860.1--3e-1At5g44610MAP18 (Microtubule-associated Protein 18)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
35.199.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.499.0GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.298.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.098.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.398.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0501GO:0006413The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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