Co-expression analysis

Gene ID Os10g0168100
Gene name
Homology with ArabidopsisSimilar to At5g28360: ACS3 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE LIKE PSEUDOGENE) (HF=8e+0)
Module size 6 genes
NF 0.20
%ile 17.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6079.70.99Os10g01681009638.m00734--8e+0At5g28360ACS3 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE LIKE PSEUDOGENE)O.I.H.G.S.X.
0.4051.10.99Os07g05465009635.m03583-Conserved hypothetical protein2e+0At5g01225unknown proteinO.I.H.G.S.X.
0.3846.90.99Os12g0160300AK103168.1-Homeodomain-like containing protein1e+0At5g64190unknown proteinO.I.H.G.S.X.
0.2117.90.99Os03g0603700BI811773-Protein prenyltransferase domain containingprotein4e+0At5g55840pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.1712.60.99Os10g0131800NM_194728.1-Conserved hypothetical protein2e+0At3g53370DNA-binding S1FA family proteinO.I.H.G.S.X.
0.094.90.99Os08g0511200AK112104.1-RNA-directed DNA polymerase (Reversetranscriptase) domain containing protein3e+0At5g26594ARR24 (Arabidopsis response regulator 24)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.299.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.699.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.498.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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