Co-expression analysis

Gene ID Os10g0167800
Gene name
Homology with ArabidopsisSimilar to At2g14835: zinc finger (C3HC4-type RING finger) family protein (HF=6e-1)
Module size 14 genes
NF 0.43
%ile 53.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7491.40.99Os10g0167800NM_195037.1--6e-1At2g14835zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5269.60.99Os01g08734009629.m06474--3e-1At3g27890NQR (NADPH:QUINONE OXIDOREDUCTASE)O.I.H.G.S.X.
0.5068.00.99Os04g04061009640.m03477--4e+0At5g62950catalytic/ nucleotide bindingO.I.H.G.S.X.
0.5068.00.99Os06g06234009634.m04036--2e+0At4g31700RPS6 (RIBOSOMAL PROTEIN S6)O.I.H.G.S.X.
0.4863.70.99Os01g0255500NM_187903.1--1e+0At5g56880unknown proteinO.I.H.G.S.X.
0.4458.10.99Os03g0236400NM_184716.1--1e-1At3g58510DEAD box RNA helicase, putative (RH11)O.I.H.G.S.X.
0.4355.40.99Os11g05296009639.m03181--3e+0At2g13126unknown proteinO.I.H.G.S.X.
0.4051.11.00Os04g05917009632.m04881--7e+0At5g59845gibberellin-regulated family proteinO.I.H.G.S.X.
0.3644.00.99Os03g03265509631.m02095--2e+0At4g26965NADH:ubiquinone oxidoreductase family proteinO.I.H.G.S.X.
0.3541.70.99Os10g04052009638.m02264--5e+0At5g44610MAP18 (Microtubule-associated Protein 18)O.I.H.G.S.X.
0.3541.70.99Os09g02413009637.m00412--5e-1At1g34520long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family proteinO.I.H.G.S.X.
0.3236.30.99Os10g0173200NM_195093.1--4e+0At5g40370glutaredoxin, putativeO.I.H.G.S.X.
0.3032.70.99Os10g01315009638.m00324--2e+0Atmg00980-O.I.H.G.S.X.
0.2625.61.00Os10g04346009638.m02552--2e+0At5g64850unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.198.7GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.598.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.398.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.098.6GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.798.6GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.198.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.798.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.598.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.498.5GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0141GO:0009058The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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