Co-expression analysis

Gene ID	Os10g0150300
Gene name
Homology with Arabidopsis	Similar to At5g17840: chaperone protein dnaJ-related (HF=2e+0)
Module size	6 genes
NF	0.60
%ile	81.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.9	0.89	Os10g0150300	BI805240	-	Protein of unknown function DUF1210 family protein	2e+0	At5g17840	chaperone protein dnaJ-related	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.60	79.7	0.90	Os10g0551700	AK107851.1	-	Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein	7e-3	At2g35960	NHL12	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.55	73.7	0.89	Os10g0150700	AK067147.1	-	Protein of unknown function DUF1210 family protein	2e+0	At5g46060	unknown protein	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.55	73.7	0.92	Os02g0816200	AK060243.1	-	Lipolytic enzyme, G-D-S-L family protein	2e-4	At3g04290	LTL1 (LI-TOLERANT LIPASE 1)	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.50	68.0	0.91	Os10g0150800	AK061299.1	-	Protein of unknown function DUF1210 family protein	2e+0	At5g14340	AtMYB40 (myb domain protein 40)	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.27	27.5	0.90	Os01g0814100	AK061173.1	-	Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein	5e-1	At2g14170	ALDH6B2	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.4	98.8	GSM159201	Inflorescence (P5, 15 - 22 cm), biological rep 1	GSE6893	Expression data for reproductive development in rice
15.1	98.6	GSM159202	Inflorescence (P5, 15 - 22 cm), biological rep 2	GSE6893	Expression data for reproductive development in rice
13.6	98.5	GSM429984	Rice wild-type panicle rep2	GSE17194	Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
10.7	98.1	GSM159203	Inflorescence (P5, 15 - 22 cm), biological rep 3	GSE6893	Expression data for reproductive development in rice
5.5	96.8	GSM159199	Inflorescence (P4, 10 - 15 cm), biological rep 2	GSE6893	Expression data for reproductive development in rice
3.7	95.6	GSM99860	TCHW P3_m103 control, biological rep3	GSE4438	Expression data from rice under salinity stress
3.6	95.5	GSM99858	TCHW P1_m103 control, biological rep1	GSE4438	Expression data from rice under salinity stress
3.5	95.3	GSM159198	Inflorescence (P4, 10 - 15 cm), biological rep 1	GSE6893	Expression data for reproductive development in rice
3.4	95.2	GSM99877	TCHW P19_ir29 control, biological rep1	GSE4438	Expression data from rice under salinity stress
3.4	95.2	GSM99859	TCHW P2_m103 control, biological rep2	GSE4438	Expression data from rice under salinity stress

Biological processes inferred to relate to the module

SF	Genes	GO ID	Process Name	Link to AmiGO
0.053	1	GO:0006869	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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